| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_2023 |
|---|
| Symbol | |
|---|
| ID | 3761752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 2233431 |
|---|
| End bp | 2234315 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637786772 |
|---|
| Product | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like |
|---|
| Protein accession | YP_392287 |
|---|
| Protein GI | 78486362 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCT TAAAAGCACT CTTGATCAGT TTTTTGGTAT TAATTTCCGG TTGCAGTTCT
CAGTCTGAAG AACCTTTAAA AATCATTACC AACAGTTGGA TTGGCTATGC CCCTCTTTTT
TACGCGAAAG AGCAGGGTTG GTTAGACGAA CACGGCATCA AACTCTCGAC GGTGGTTTCG
TTGGGTGAGA GCACACACAT CTACCATTCG GCTAATCTCG ATGGGTTTAC AGGAACTCAA
TACGAGTTTA ATCAAGCCTA TAAAAAAGAT TCGACCTTGA CGCCCATTAT CATGTTCGAT
CGTTCCGTGG GCGCGGATAT GGTTATGAGC AATCGTAGTC TTGACGCGCT TCGAGCCATT
CCTCCCAACC ACCCTATTGA CGTTTTTCTG GAAATCAACA GTGTCAACTA CCCGGTTTTT
AACGATTTTA AACAGCGCTA CGGTCTTTCA AATCAGTCGT TTAACTTAAT CAATAACGAT
CATTTAAAAA TGCAGCACGC CATTACTCAA AAAGACAGTC CGAGCATTAT CGTGACCTAT
GCGCCTTACA ATCATCAACT GGAAAAACAG GGCTTTAAAA CCATTGCTTC GACTGGCGAA
GGATTAGATT TATTAGTCTT GGACGCGCTT TACACCAATC AAGAAAATTA TCAAACTCAT
CAACATCAAT TTTTAGCATT AAAAACGCTG GTGGATCGCG CAATTCAAGC TTTAGAACAA
AATCCTCAAC ACTTCTACAA AAAGGTCAGT CCTTACCTGG AAAGCGCAAG CTATGAAGAA
TTCCAAGAAA GCCTGCAAAC CATTGAATGG TTGAACGGAG GCATATCGCC ATCACTCATT
GATCGAATCA ATGAAGCTCA ATTTCCAATA AGAGATTTGT TATAG
|
|---|
| Protein sequence | MNALKALLIS FLVLISGCSS QSEEPLKIIT NSWIGYAPLF YAKEQGWLDE HGIKLSTVVS
LGESTHIYHS ANLDGFTGTQ YEFNQAYKKD STLTPIIMFD RSVGADMVMS NRSLDALRAI
PPNHPIDVFL EINSVNYPVF NDFKQRYGLS NQSFNLINND HLKMQHAITQ KDSPSIIVTY
APYNHQLEKQ GFKTIASTGE GLDLLVLDAL YTNQENYQTH QHQFLALKTL VDRAIQALEQ
NPQHFYKKVS PYLESASYEE FQESLQTIEW LNGGISPSLI DRINEAQFPI RDLL
|
|---|
| |