Gene Tcr_1877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1877 
Symbol 
ID3761090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2052858 
End bp2053331 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content46% 
IMG OID637786620 
ProductAsnC family transcriptional regulator 
Protein accessionYP_392141 
Protein GI78486216 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACCG AACATTTCGA TAAATACGAC AAAGCCATTC TGCGCACCTT GCAAAATAAC 
GGCCGTTTAA GCAATCAAGA ACTCGCTGAA GAAATTGGTT TATCACCTTC AGCTTGTTTA
AGGCGTTTCA AAGCGTTGGA AGAGGCGGGC GTGATTGTCG GCTACCGTGC TTTGCTGGAT
GCCAAATCCT TGGGACTCGA TTTAATGGCG TTGGTGCATA TCTCGATGGA CAAACACACC
CAAGAGCGCT TTCGTGCCTT TGATGAAGCG GTGCAAGCGT TACCGAATAT CGTGGAGTGT
TTACTGCTCA CCGGGCAAAC GGCGGATTAT CAACTCAAAG TGGTGGTGAA AGACTTGGAA
GCTTATCAAG ATTTATTGCT CAATCACATC ACCCAAATCG AAGGCGTAAG TGGCGTCCAT
ACCAGTTTTG TATTACGCAA AGTGGTGGAT AAAACAGCCT TGCCGATTGA ATAA
 
Protein sequence
MTTEHFDKYD KAILRTLQNN GRLSNQELAE EIGLSPSACL RRFKALEEAG VIVGYRALLD 
AKSLGLDLMA LVHISMDKHT QERFRAFDEA VQALPNIVEC LLLTGQTADY QLKVVVKDLE
AYQDLLLNHI TQIEGVSGVH TSFVLRKVVD KTALPIE