| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1785 |
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| Symbol | |
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| ID | 3761826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1955929 |
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| End bp | 1957068 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637786528 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_392051 |
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| Protein GI | 78486126 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000000374535 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAGCA GAAGAGACTT TATTAAACAT TTATTAGCCC TGAGTGCACT TGGTACTGGC
TCACTCAGTA CGGTCAGCTA CGGAAAAGCA ACCAGGCCTG GTCATTTTTC AACCGGCGTG
GTCCTCGACC CTTTATTCTT TAAACACGAC ATGAGCGGCC ACCCTGAAAA TGCACAACGC
TTAGTGGCTA TTAATAATGA AATGGAAAAA CAAGGCATCT GGCCTCAACT AACGCCCGTG
GCAACACGAT TAGCCACCAA TGAAGAATTA TTACTTGCTC ATACACAAAG CTATATTGAT
GAAATAGAAA TATTAAGCGA TTCTGGCGGC GGCTTTTACG AACCTTATCA GGGCGACACT
TACTTAAATG CGTCCAGCTT TGACGCAGCC AAAATGGCCG CCGGCAGTAA CATCAACTTA
AACCTCGCCA TTTATGATCG AAAGATCGAC CATGGTTTCG CCCTGCTTCG TCCGCCAGGC
CACCATGCAT TGCAAAATAA AGCCATGGGG TTTTGCATTT TCAACTCCGA CATCATTGCC
GCCCGCGCAT TACAAAAATA CCGCGGCGTA AAACGCATTG CCATTATTGA TTTCGATGTT
CATCACGGCA ATGGCACCCA AGATTTATCG GATAACGATC CATCCATTAT GTCGATCTCG
ATCCACCAAC ACCCTTTTTG GCCAATGACG GGCGGGCACA CATTTACCGG AAAAGACAAG
GCAAAAGGCA CAGTCGTTAA TTGCCCATTC CCAAAAGGAG CTGGTGATCA AACCTACTTA
AATGTCTACG ACCAAGTCAT TCACCCAAAA TTAGAAGCTT TCAAGCCAGA GCATATTATT
GTCTTTGCGG GGTATGATGC GCACTGGCAA GATCCTTTAG CCCAGCATCA AGTCTCGGTA
GCCGGGTTCA ATCAACTCGT AGACAAATGC CTCAAGTCTG CCAAAGAACT TTGCGGCGGT
CGAATCAGTT TTTCTCTGGG CGGCGGCTAT AATTTAAACC CGTTAGCACA ATGCGCTGTC
GGCACTTTCC ACACCTTATT AGGCAACCCT GAAAAAAACA TCGACTCTAT TGGAAAAGCA
CCAACCCCTG AGGTCGATTA TCAACAACGG ATACAAGAAC TGGTCATACA CCACTTATAA
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| Protein sequence | MSSRRDFIKH LLALSALGTG SLSTVSYGKA TRPGHFSTGV VLDPLFFKHD MSGHPENAQR
LVAINNEMEK QGIWPQLTPV ATRLATNEEL LLAHTQSYID EIEILSDSGG GFYEPYQGDT
YLNASSFDAA KMAAGSNINL NLAIYDRKID HGFALLRPPG HHALQNKAMG FCIFNSDIIA
ARALQKYRGV KRIAIIDFDV HHGNGTQDLS DNDPSIMSIS IHQHPFWPMT GGHTFTGKDK
AKGTVVNCPF PKGAGDQTYL NVYDQVIHPK LEAFKPEHII VFAGYDAHWQ DPLAQHQVSV
AGFNQLVDKC LKSAKELCGG RISFSLGGGY NLNPLAQCAV GTFHTLLGNP EKNIDSIGKA
PTPEVDYQQR IQELVIHHL
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