| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1741 |
|---|
| Symbol | |
|---|
| ID | 3762003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 1900802 |
|---|
| End bp | 1901368 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637786479 |
|---|
| Product | translation elongation factor P |
|---|
| Protein accession | YP_392007 |
|---|
| Protein GI | 78486082 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
|---|
| TIGRFAM ID | [TIGR00038] translation elongation factor P |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACAG TCAGTACAAG TGAATTTAAA AACGGTTTGA AATTTTTAAT GGATGGTCAA
CCTTGCACCA TCGTTGATAA TCAAATCGTG CAACCCGGGA AAGGCCAAGC ATTTAACCGA
GTTAAGTTTC GTAACTTGAT TACTGGACGT GTTTTGGAAA ATACGTTCAA ATCAGGTGAG
AAAGTGGAAG CGGCTGATGT CATGGATACG GATTTACAGT ATTTGTATAA CGACGGTGAA
TTCTGGCACT TTATGGATCC GAACACGTTT GAACAATATC AAGCAGGGGA AGCCGCCGTT
GCCGATGTGC AAAAATGGCT GATTGAACAA GATATGTGCA CTGTCACCTT ATGGAATGGG
GATCCGATTT CGGTGTTGCC TCCAAAACAA GTGGTGTTAG AAGTCACTGA AACCGATCCA
GGTTTAAAAG GCGATACGGC GGGAACGGGC GGAAAACCTG CAACGCTATC AACGGGCGCG
GTGGTTCAAG TGCCTTTGTT TATTCAAATT GGTGAGAAAG TGATTTGTAA TACCCAGACA
GGTGAATACA TCTCACGTGC TAAGTAA
|
|---|
| Protein sequence | MATVSTSEFK NGLKFLMDGQ PCTIVDNQIV QPGKGQAFNR VKFRNLITGR VLENTFKSGE
KVEAADVMDT DLQYLYNDGE FWHFMDPNTF EQYQAGEAAV ADVQKWLIEQ DMCTVTLWNG
DPISVLPPKQ VVLEVTETDP GLKGDTAGTG GKPATLSTGA VVQVPLFIQI GEKVICNTQT
GEYISRAK
|
|---|
| |