Gene Tcr_1525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1525 
Symbol 
ID3762095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1662452 
End bp1663303 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content45% 
IMG OID637786261 
Productpantoate-beta-alanine ligase 
Protein accessionYP_391791 
Protein GI78485866 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0414] Panthothenate synthetase 
TIGRFAM ID[TIGR00018] pantoate--beta-alanine ligase
[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.102611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGTTT TGGACTCGGT TAGTACCCTA CGCGAAAGTA TTCAAAAGTG GCGCAAAGCC 
GGTTTAACCA TTGGATTTGT GCCGACAATG GGCAATCTTC ATGCGGGGCA TTTAAGTCTG
GTTAAGCAAG CTCGGCAAAA AAGCGACAAA GTCATTGTCA GTATCTTTGT GAACCCGCTT
CAGTTCGGCC CGGATGAAGA CTACGATCGT TATCCTAGAA CTTTTGAAGC CGATAAAGCA
TTGCTTCAGC AACATAACGC GGACGCGGTT TTTTGTCCTT CCGTTGATGA AATGTATCCA
AATGGGCAAG CACAAACCCG TGTAATCGCT CCTGAAAAAA TGACAAGCAT TTTAGAGGGG
GCAAAACGCC CCGGCCATTT TGACGGGGTA ACAACGGTTG TCGCAAAACT GTTTAATATG
GTTCAACCGG ATATTGCTAT TTTGGGACAA AAAGACTTTC AACAGTTTGC GGTGTTACAG
CAGATGGTTG AAGATTTAGC TCTGTCAGTC GAACTGATTC GTGCGCCTAT TGTGCGAGAT
GAGACGGGGC TAGCGCTCAG CTCTCGAAAC CAATATTTAA CGGAAATTCA ACGCTCAGTA
GCGCCTAAAC TCTTTGTGGC GTTACAATCG ATAGAAATGG CCATTCGTTC GGGCAATAAA
AACTATTCTT CTTTGTGTCA AATAGCTACT CAGCAAGTGC TTTCAGACGG GTTTGATGCC
GTTGATTATA TACAGGTTTT GAATGCGTCG TCTTTAGAAG AGCCTCAGCA AGGCGATCAG
GCGCTTGTTA TTGTTGCGGC TGCAAAGCTG GGTCAAACAC GCTTGTTAGA TAATGTGTTA
GTGAGTCTGT GA
 
Protein sequence
MVVLDSVSTL RESIQKWRKA GLTIGFVPTM GNLHAGHLSL VKQARQKSDK VIVSIFVNPL 
QFGPDEDYDR YPRTFEADKA LLQQHNADAV FCPSVDEMYP NGQAQTRVIA PEKMTSILEG
AKRPGHFDGV TTVVAKLFNM VQPDIAILGQ KDFQQFAVLQ QMVEDLALSV ELIRAPIVRD
ETGLALSSRN QYLTEIQRSV APKLFVALQS IEMAIRSGNK NYSSLCQIAT QQVLSDGFDA
VDYIQVLNAS SLEEPQQGDQ ALVIVAAAKL GQTRLLDNVL VSL