Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1525 |
Symbol | |
ID | 3762095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1662452 |
End bp | 1663303 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637786261 |
Product | pantoate-beta-alanine ligase |
Protein accession | YP_391791 |
Protein GI | 78485866 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0414] Panthothenate synthetase |
TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase [TIGR00125] cytidyltransferase-related domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.102611 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTGTTT TGGACTCGGT TAGTACCCTA CGCGAAAGTA TTCAAAAGTG GCGCAAAGCC GGTTTAACCA TTGGATTTGT GCCGACAATG GGCAATCTTC ATGCGGGGCA TTTAAGTCTG GTTAAGCAAG CTCGGCAAAA AAGCGACAAA GTCATTGTCA GTATCTTTGT GAACCCGCTT CAGTTCGGCC CGGATGAAGA CTACGATCGT TATCCTAGAA CTTTTGAAGC CGATAAAGCA TTGCTTCAGC AACATAACGC GGACGCGGTT TTTTGTCCTT CCGTTGATGA AATGTATCCA AATGGGCAAG CACAAACCCG TGTAATCGCT CCTGAAAAAA TGACAAGCAT TTTAGAGGGG GCAAAACGCC CCGGCCATTT TGACGGGGTA ACAACGGTTG TCGCAAAACT GTTTAATATG GTTCAACCGG ATATTGCTAT TTTGGGACAA AAAGACTTTC AACAGTTTGC GGTGTTACAG CAGATGGTTG AAGATTTAGC TCTGTCAGTC GAACTGATTC GTGCGCCTAT TGTGCGAGAT GAGACGGGGC TAGCGCTCAG CTCTCGAAAC CAATATTTAA CGGAAATTCA ACGCTCAGTA GCGCCTAAAC TCTTTGTGGC GTTACAATCG ATAGAAATGG CCATTCGTTC GGGCAATAAA AACTATTCTT CTTTGTGTCA AATAGCTACT CAGCAAGTGC TTTCAGACGG GTTTGATGCC GTTGATTATA TACAGGTTTT GAATGCGTCG TCTTTAGAAG AGCCTCAGCA AGGCGATCAG GCGCTTGTTA TTGTTGCGGC TGCAAAGCTG GGTCAAACAC GCTTGTTAGA TAATGTGTTA GTGAGTCTGT GA
|
Protein sequence | MVVLDSVSTL RESIQKWRKA GLTIGFVPTM GNLHAGHLSL VKQARQKSDK VIVSIFVNPL QFGPDEDYDR YPRTFEADKA LLQQHNADAV FCPSVDEMYP NGQAQTRVIA PEKMTSILEG AKRPGHFDGV TTVVAKLFNM VQPDIAILGQ KDFQQFAVLQ QMVEDLALSV ELIRAPIVRD ETGLALSSRN QYLTEIQRSV APKLFVALQS IEMAIRSGNK NYSSLCQIAT QQVLSDGFDA VDYIQVLNAS SLEEPQQGDQ ALVIVAAAKL GQTRLLDNVL VSL
|
| |