| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1141 |
|---|
| Symbol | |
|---|
| ID | 3762129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 1233812 |
|---|
| End bp | 1235089 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637785862 |
|---|
| Product | manganese transporter NRAMP |
|---|
| Protein accession | YP_391410 |
|---|
| Protein GI | 78485485 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
|---|
| TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTATC AAGACGCAGA GAAAATGCAA CATCAGCGTT CATTCTGGTA TTTTCTAGGC
CCTGCCTTTT TAGTTTCGGT TGGGTACATG GACCCTGGAA ATTGGGCCAC CTCGATAGAA
GCCGGGTCGC GTTATGGTTA TGATCTTTTG TGGGTTATTA CGTTAGCGTC TTTGGTCGCC
ATACTAATGC AGCTTTTAAG CGCGAAACTA GGCATTGCGA CCGGAAAAAA TCTCGCTCAA
ATGATTCGGG TTCAACACCC TGGAAAAGGG GGCACATTTT TACTGTCATC GGCTGCGTTA
GCAATGGTGG CTACCGATTT GGCAGAATTT TTGGGGGTTG CGGTCGCTTT AAACCTGCTG
TTTGATATTC CTTTGGTTGC GGCTATTTTC TTAACCATAT TTGATGTGTT GTTGATCCTG
TGGTTGGAAC GTTTTGGTTT TCGCTGGGTG GAAGTGACCA TTTTCGCATT TGTGGCTACG
ATTGGACTCG GTTATGTTGT TGAACTGTGG TTGGTGCAAC CCGATTGGGT AGAGGTGGCT
CAGGCCTTAG CAGTGCCGAA TGATACGATT ATGGATACCA CCGCTCTGTT CATTGCCATG
GGTATTTTAG GCGCGACGGT CATGCCGCAT AATTTATACC TGCATTCCCA TCAGGTCACA
ACGCGTTCCA ACTTGGCCGG TGACGCTTTG CAACGGTTTT ATAAGATGAT GAAGTGGGAT
ACGATTCTGG CGTTGACAGC GGCTTGGGTC GTTAATTCGG CTATTCTAAT TATGGCCTCC
GCGGCCTTCC ATGAAAAAGG GTTGTTAATC ACCGATATTG ATGAGGCTTA TCATACCTTA
GGCCCTTTAC TGGGAAGTTC CGCAGCCTTA ACGTTTGCGA TTGCATTATT GGCTTCTGGG
ATAGCCAGTT CAGCGACAGG CACGTTGGCT GGACAAATCG TGTTTGAGTC TTTTTTCAAA
AAGCGTCCAA TCAATATTCT GAAAATTCGA GTTTATATTC GTTTGGCAAC CATGATTCCT
GCCGCAATAG CAATTTTATT GAGTGCTAAG CCTTTAAGTT TGTTGGTTTT ATCTCAAGTG
ATTTTGTCGA TGCAATTACC GTTTGCGGTT ATCCCTTTGG TGATGATGAC ATCGAATACC
ACATTGATGG GAGATTTGGT GAACCAACCT AAAACCAAAC TGATGGCATG GACAGCAACG
GTTATTATTG TTGCATTGAA TTTGTGGCTG CTGGGAATGT TATTTTGGGA AGGATTTCAT
AAGATGAATC TGCATTGA
|
|---|
| Protein sequence | MDYQDAEKMQ HQRSFWYFLG PAFLVSVGYM DPGNWATSIE AGSRYGYDLL WVITLASLVA
ILMQLLSAKL GIATGKNLAQ MIRVQHPGKG GTFLLSSAAL AMVATDLAEF LGVAVALNLL
FDIPLVAAIF LTIFDVLLIL WLERFGFRWV EVTIFAFVAT IGLGYVVELW LVQPDWVEVA
QALAVPNDTI MDTTALFIAM GILGATVMPH NLYLHSHQVT TRSNLAGDAL QRFYKMMKWD
TILALTAAWV VNSAILIMAS AAFHEKGLLI TDIDEAYHTL GPLLGSSAAL TFAIALLASG
IASSATGTLA GQIVFESFFK KRPINILKIR VYIRLATMIP AAIAILLSAK PLSLLVLSQV
ILSMQLPFAV IPLVMMTSNT TLMGDLVNQP KTKLMAWTAT VIIVALNLWL LGMLFWEGFH
KMNLH
|
|---|
| |