Gene Tcr_1073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1073 
Symbol 
ID3761821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1151288 
End bp1152112 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content42% 
IMG OID637785794 
Productabortive infection protein 
Protein accessionYP_391342 
Protein GI78485417 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAC CTTCCTCACT TCCTAACCAA GATACCTTTT CTTTATTCAG CTTAGTTCCT 
TTTTTGCTTA TTACATTTGG TATTTCTTGG GGCATTTTAG GGCTCTATAT TGCCTTACCT
GAATCCATGA GTGCGTTGTT TGGAAACATT TCAGGACAAC ATCCTCTTTT TTTTCTAGCG
GTTTATGCAC CGGCTATAGC AGCCATTCTT ATTATTAGCT ATCATGCTGG ATGGCAAGGT
CTAAAACGAT ATTTCAGCCG GCTTACCTTA TGGCGAACCT CACTGACATG GTATATTTTC
TTAATGTTAG GGATTCCTTT GACCTTTTTC ATCGGTGCCG CCATAAAAGG CACTTTATCC
TCTGCATTTC TTATCCCATC TTCTTTTCAA TTGTTACTGA TGATGCTTCT TATTACCTTA
ATCAAAGGCC CTGTAGAAGA GTTAGGGTGG CGAGGGTTCA TGCTGCCTTT ATTGCAGCGA
AACCTTTCTC CTTTTTGGGC GGGTATACTT CTAGGCGTTA TCTGGGGGAT ATGGCATCTT
CCAGCGTTCT TTTTAAGTGG CACGCCACAA GGGGCATGGG ATTTCATGCC TTTTTTTACC
GGTTCTGTTG CGCTGAGTAT CATTATCACA GCATTATTTA ATGCATCAAA TGGAAGCATA
CTGCTCCCTG CATTATTTCA TTTCCAGCTT ATTAACCCCT TATGGCCTGA CGCTCAGCCT
TACGACACCT ATTTACTGAT TATCGTAGCG TTACTCGTCG TTGGGTATAA CCGGGAAACA
ATGTTTTCTA GAAACAAGGC TATTACTGAG GTCATTCCGT CTTAA
 
Protein sequence
MSKPSSLPNQ DTFSLFSLVP FLLITFGISW GILGLYIALP ESMSALFGNI SGQHPLFFLA 
VYAPAIAAIL IISYHAGWQG LKRYFSRLTL WRTSLTWYIF LMLGIPLTFF IGAAIKGTLS
SAFLIPSSFQ LLLMMLLITL IKGPVEELGW RGFMLPLLQR NLSPFWAGIL LGVIWGIWHL
PAFFLSGTPQ GAWDFMPFFT GSVALSIIIT ALFNASNGSI LLPALFHFQL INPLWPDAQP
YDTYLLIIVA LLVVGYNRET MFSRNKAITE VIPS