Gene Tcr_0984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0984 
Symbol 
ID3762162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1060893 
End bp1061819 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content43% 
IMG OID637785705 
ProductABC transporter related 
Protein accessionYP_391253 
Protein GI78485328 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCTC CCGCTGTTTC ATTTCAGGCT GTTAAAAAAC AGTATGGTTC TTTGGAAGCC 
TTGAAAGGGG TTTCTTTTGA TGTCAGGCCT GGTAGTTTTT TTGGTTTATT GGGTCCAAAT
GGAGCCGGAA AGTCGACATT GATTAACAGC ATGGCAGGTC TGGTCAAGCC GACATCCGGT
AAAATTTTGG TGAACGGGTA TGATGTGAAT ACCGATTATC GCCAAGCTCG ACGCTACTTG
GGAGTGGTTC CGCAAGAATT AATATCGGAT CCTTTTTTTA CATTGCGTGA GTTGTTGGAT
ATTCAAAGTG GCTACTTCGG TTTAAGAAGT CGTGAACAAA AGTTATGGAT TGATGAATTG
CTGGAACGTT TGGCTTTGTC TGATAAGGCC AATGCCGTAA CGAATGAGCT GTCCGGAGGG
ATGAAAAGAC GAGTGCTGAT TGCAATGGCA TTGGTTCATC GTCCAGAAGT GTTGGTGTTG
GATGAGCCGA CAGCAGGGGT CGATGTTGAC TTGAGACGCA CCCTTTGGGA GTTCACTAAA
GAGCTGCATA AAAAAGGTCA TACAATCATT CTGACCACGC ATTATCTGGA AGAAGCGGAA
GCGTTGTGTG AAGAGGTTGC CATTGTAAAA GGTGGTGAGC TTAAAGCAAT GGAAACGACC
TCTGATCTGT TGTCTCGGCA TAATTATCGT TATTTAAGAG TTGTGCTGGA AGCTTCGGCA
GGATTTGAAG AAGCTAAATT ATCGCCTGAA TTAAAAGAGC GTTTCATTGA ACAGGATGCA
AATGGTTTGA TGTTTAAATT GGAAAAAAAT GTGCCTTTAA ATCAAATGTT AAACTGGCTT
GCTCAAAGCC ATTTAAGTGT AAGAGATTTA ACCAGTCGAG ACGCGACATT AGAAGAAGTC
TTTTTAGATT TAACGGGAGA GGCTTAA
 
Protein sequence
MSAPAVSFQA VKKQYGSLEA LKGVSFDVRP GSFFGLLGPN GAGKSTLINS MAGLVKPTSG 
KILVNGYDVN TDYRQARRYL GVVPQELISD PFFTLRELLD IQSGYFGLRS REQKLWIDEL
LERLALSDKA NAVTNELSGG MKRRVLIAMA LVHRPEVLVL DEPTAGVDVD LRRTLWEFTK
ELHKKGHTII LTTHYLEEAE ALCEEVAIVK GGELKAMETT SDLLSRHNYR YLRVVLEASA
GFEEAKLSPE LKERFIEQDA NGLMFKLEKN VPLNQMLNWL AQSHLSVRDL TSRDATLEEV
FLDLTGEA