Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0984 |
Symbol | |
ID | 3762162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1060893 |
End bp | 1061819 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637785705 |
Product | ABC transporter related |
Protein accession | YP_391253 |
Protein GI | 78485328 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGCTC CCGCTGTTTC ATTTCAGGCT GTTAAAAAAC AGTATGGTTC TTTGGAAGCC TTGAAAGGGG TTTCTTTTGA TGTCAGGCCT GGTAGTTTTT TTGGTTTATT GGGTCCAAAT GGAGCCGGAA AGTCGACATT GATTAACAGC ATGGCAGGTC TGGTCAAGCC GACATCCGGT AAAATTTTGG TGAACGGGTA TGATGTGAAT ACCGATTATC GCCAAGCTCG ACGCTACTTG GGAGTGGTTC CGCAAGAATT AATATCGGAT CCTTTTTTTA CATTGCGTGA GTTGTTGGAT ATTCAAAGTG GCTACTTCGG TTTAAGAAGT CGTGAACAAA AGTTATGGAT TGATGAATTG CTGGAACGTT TGGCTTTGTC TGATAAGGCC AATGCCGTAA CGAATGAGCT GTCCGGAGGG ATGAAAAGAC GAGTGCTGAT TGCAATGGCA TTGGTTCATC GTCCAGAAGT GTTGGTGTTG GATGAGCCGA CAGCAGGGGT CGATGTTGAC TTGAGACGCA CCCTTTGGGA GTTCACTAAA GAGCTGCATA AAAAAGGTCA TACAATCATT CTGACCACGC ATTATCTGGA AGAAGCGGAA GCGTTGTGTG AAGAGGTTGC CATTGTAAAA GGTGGTGAGC TTAAAGCAAT GGAAACGACC TCTGATCTGT TGTCTCGGCA TAATTATCGT TATTTAAGAG TTGTGCTGGA AGCTTCGGCA GGATTTGAAG AAGCTAAATT ATCGCCTGAA TTAAAAGAGC GTTTCATTGA ACAGGATGCA AATGGTTTGA TGTTTAAATT GGAAAAAAAT GTGCCTTTAA ATCAAATGTT AAACTGGCTT GCTCAAAGCC ATTTAAGTGT AAGAGATTTA ACCAGTCGAG ACGCGACATT AGAAGAAGTC TTTTTAGATT TAACGGGAGA GGCTTAA
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Protein sequence | MSAPAVSFQA VKKQYGSLEA LKGVSFDVRP GSFFGLLGPN GAGKSTLINS MAGLVKPTSG KILVNGYDVN TDYRQARRYL GVVPQELISD PFFTLRELLD IQSGYFGLRS REQKLWIDEL LERLALSDKA NAVTNELSGG MKRRVLIAMA LVHRPEVLVL DEPTAGVDVD LRRTLWEFTK ELHKKGHTII LTTHYLEEAE ALCEEVAIVK GGELKAMETT SDLLSRHNYR YLRVVLEASA GFEEAKLSPE LKERFIEQDA NGLMFKLEKN VPLNQMLNWL AQSHLSVRDL TSRDATLEEV FLDLTGEA
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