| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0196 |
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| Symbol | |
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| ID | 3762252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 230176 |
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| End bp | 232683 |
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| Gene Length | 2508 bp |
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| Protein Length | 835 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637784901 |
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| Product | DNA topoisomerase |
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| Protein accession | YP_390466 |
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| Protein GI | 78484541 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAATT TGGTGATAGT GGAGTCTCCT GCTAAAGCTA AGACCATAGA AAAATACTTG
GGCAAAGGGT TTACCGTTCG TTCAAGCTAT GGCCATATCC GTGACATCCA GAAAAAAGGG
ATGGGGATTG ATATTGAAAA TGGTTTTATG CCGAATTATG AAATTTCGCC GGATAAAAAG
AAGACTGTTA CCGAGTTGCG CAAGTTAACC AAAGAGGCTG AAACAGTCTG GCTCGCAACG
GATGAGGACC GCGAAGGGGA AGCCATTGCA TGGCACCTAG CGGAAGCTTT AAAATTGGAT
GTTAATGATA CCAAGCGTAT CGTCTTTCAT GAGATTACCA AAACAGCGAT ACAAAAAGCC
ATTGCCGAAC CTCGTAAGGT GGATATGGAT TTGGTTGAGG CGCAACAGGC TCGCCGTATT
CTTGATCGCA TCGTGGGGTT TGAGTTATCC CCTATTTTAT GGAAAAAAAT CCGAACAGGC
TTATCTGCTG GGCGTGTTCA GTCTGTCGCT GTGCGTTTGA TTGTTGAGAG AGAACGTGAG
ATCGATGCGT TTGAGTCGGA TTATGTCTAT CGCCTTCAAG GAGCGTTGGA CATTTTAGAT
GAAAGCCAAC AAGTGGTTGG AGCCGTTGAG GTCAAGCGAA GCGCCGCCTT TAAGACGGAA
GAAGAAGCGC AAGCCTATTT AGAGCAAGTG AAAGAAGCGG CCTTGACGGT TTCCCAGTTA
GAAGAAAAAC CGGCGAAAAA ATCACCAAAA GCCCCTTTTA CAACATCCAC CCTGCAACAG
GAAGCGTCGT CAAAATTGGG CTTTTCTGTA AAGCAAACCA TGATGATCGC ACAGCGTTTG
TATGAGTCCG GAAAGATTAC TTATATGCGT ACCGACTCGG TCAATTTATC TGAAGAAGCC
ATCCAGAAAG CACACGATGA AATCGTGTCC GAGTTTGGCG AGTCTTACTC AACAACGCGT
CGTTATAAAA CCAAAAATGC TGATGCGCAG GAAGCGCATG AGGCGATTCG CCCCACGGAT
TTTTCAGTGA AGTCGGTGAC GGGTGAGCGA AATGAACAAC GTCTCTATCA GTTGATTTGG
CGACGAGCGA TTGCCTCTCA AATGGCGGAC GCTCAGTTAA AAAGAACCAA TGTGGATATT
GCCCTTGAAG GCATGCCTGC TGAAAAACTG GTGGCGAAAG GCGAAGTCAT TACGTTTGAC
GGTTTTTTAA AAGTGTATAA CCTGGACGAT GATGCCAAAG AAGGACAGTT GCCGCCATTA
AAGGTCGGTC AGGCCTTAAA GCTGGGTGAG CTGCTCGTAA GACAGAGTTT CTCCAGACCG
CCTGCACGTT ACAATGAGGC CAGCTTGGTT CGTACATTGG AAGAGATGGG CATTGGCCGT
CCTTCGACTT ATGCACCTAC CATTGATACC ATTCAACAGC GTGGTTATGT TGTGAAGGAA
GATCGTGAAG GGCGCCAACG TGACTATCGT CAATTGTCGT TGACGGTCGA TGGTATTGAT
GCCAGCACGC TGACCGAAAC AACAGGAACC GAAAAGAATA AACTCTTCCC AACCGATATC
GCTGGCATTG TCACCGATTT CTTGGTGAAG CATTTTGGGG ATGTACTGGA CTATAAATTT
ACCGCTTTGG TGGAATCTGA ATTCGATACC ATTGCGCAGG GTAAAGAATC CTGGCAAGAA
ATGTTGACGA AGTTTTATCA GCAATTTCAC CCCAGAGTGG ATGCCGCTGA AGATGTTTCC
AGAGAAGAAG CCGGGCAGTC CCGTGCTTTG GGGAATGATC CAAAAACAGG GAAGCCGATG
TTCGTTAAAA TCGGGCGTTT TGGGCCTTAT GTGCAATTAG GTGACGGTGA GAATGAAGAG
AAGCCGACCT TTGCCAGCTT GATGCCTGGG CAAAAGATGG ATACGCTCAA GCTGGAGGAA
GCGTTAGAGT TGTTCAAATT GCCGCGAGAA GTCGGGCAAA TGCCGGAATC GTTTTCCGCT
AAAGCCGTCG ATGGCACTGA GTTCGCCGTT GAAAAAGGGC AGATAATTAT TGCTAAACAG
GGACCTTTTG GCCCTTATTT GGAATATGGG CCGAAGATGT ATGCGCCAAT TAAGGGATTT
GACCCTCTGA GTATTGAGCT GGAAGATGCC GTCGCATTGA TTGAGTCGAA AATCGTGACC
GAGGCGGAAA AGATTATCAA GGTTTTTCCA GGAACGGATG TGAAGATTCT AAAAGGTCGA
TGGGGGCCTT ATATCACGGA TGTGACGACC AAAAAGAATG CGAAGATCAA AAAAGATGAA
GACGCGCTGG ACTTAAGTCT GGAAGAATGT CAGAAACGAT TGGATGAAGC ACCGGAGCCG
AAAAAACGTG GACGGGTGGC TGCGAAAAAG AAAGCCCCGG CTAAGAAGGC GGCCGCCAAA
AAAACCACAG CCAAAAAGCC TGCTGCGAAA AAGCCGGCCG CAAAGAAAGC GCCAGCTAAA
AAAACAACAC GTAAAACGCC GGCTAAAAAG ACATCTGACA AGTCGTAA
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| Protein sequence | MTNLVIVESP AKAKTIEKYL GKGFTVRSSY GHIRDIQKKG MGIDIENGFM PNYEISPDKK
KTVTELRKLT KEAETVWLAT DEDREGEAIA WHLAEALKLD VNDTKRIVFH EITKTAIQKA
IAEPRKVDMD LVEAQQARRI LDRIVGFELS PILWKKIRTG LSAGRVQSVA VRLIVERERE
IDAFESDYVY RLQGALDILD ESQQVVGAVE VKRSAAFKTE EEAQAYLEQV KEAALTVSQL
EEKPAKKSPK APFTTSTLQQ EASSKLGFSV KQTMMIAQRL YESGKITYMR TDSVNLSEEA
IQKAHDEIVS EFGESYSTTR RYKTKNADAQ EAHEAIRPTD FSVKSVTGER NEQRLYQLIW
RRAIASQMAD AQLKRTNVDI ALEGMPAEKL VAKGEVITFD GFLKVYNLDD DAKEGQLPPL
KVGQALKLGE LLVRQSFSRP PARYNEASLV RTLEEMGIGR PSTYAPTIDT IQQRGYVVKE
DREGRQRDYR QLSLTVDGID ASTLTETTGT EKNKLFPTDI AGIVTDFLVK HFGDVLDYKF
TALVESEFDT IAQGKESWQE MLTKFYQQFH PRVDAAEDVS REEAGQSRAL GNDPKTGKPM
FVKIGRFGPY VQLGDGENEE KPTFASLMPG QKMDTLKLEE ALELFKLPRE VGQMPESFSA
KAVDGTEFAV EKGQIIIAKQ GPFGPYLEYG PKMYAPIKGF DPLSIELEDA VALIESKIVT
EAEKIIKVFP GTDVKILKGR WGPYITDVTT KKNAKIKKDE DALDLSLEEC QKRLDEAPEP
KKRGRVAAKK KAPAKKAAAK KTTAKKPAAK KPAAKKAPAK KTTRKTPAKK TSDKS
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