Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0086 |
Symbol | |
ID | 3762220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 110878 |
End bp | 113217 |
Gene Length | 2340 bp |
Protein Length | 779 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637784791 |
Product | hypothetical protein |
Protein accession | YP_390356 |
Protein GI | 78484431 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAATA AACACAAAAA AAATGCTCTT AACTTAGTCC GAAAAACAAA AGTAGCCTTC GACAAGACAA CTCCCATGTT GAAGCTAAAT GCAAATACCG ATCAGGCAGC AAAATGGAAC GAAGACTGGC GATCTTTTCA CCAAGGTTTA CCTATTAAAT TCTATTTTCA GAAATGGGCT ACAAACTCCG ATAGCTCCAA CCTTGACTTA GCGAGGGTCT ATGCAATCGA ATCTTTAGCT ACAAACAAAG GAATAAAAAA TATTACATCA ACCCTCCGGT ATGCCACAAG AGCTTTAGGA GAGTTAACTA AAGACATAAG CGAATTGGAG CAAAGTGATT TTGATAACCT GTCAAAGGCT TTCAACAAAA AGGGGTTTTC TGAAACGCAT GCATCAATAT TTTGGACATG GTGCAAAAAA TGCGAACTTA TCCCCGAATA CCTCTCGACA CCTTCAAAAT CTGACTCCAG GGATAGAAGT GCGGGAGAGG CAGAAAAAAG AAGAAAGAAA AAGCTTTTAG ATGATGAACA AGTAGCAGCT ATCGGAGTGG CTTACAACGA ACTATTTTCT GATGACGGTT TGAAGAAATA CAGCTTTCGA GAATATTCAA AAGAGTATTT TACATTGGCT TTTTTGACGC TATCAGCATC AAGCCCTTCG CGTATGGATT CAGAAATTTT TGCTCTTCCG GAGCAAAAAC TGAAGACACA TATTGATGAA GACGGTGTTG AGACTCATAG CTTATTCTGG AAAGGATCAA AAGGCCACGA AGATAACCGT ACGCACATTC TAGGGGCACT AAAAGACCAT GTTGAAAAGG TTATCGAAGT CGTCGGGAAG GAATCCTTGC CAGCTAAAAT TTTATCGTGG TTTATGTCAA GGCCTGATAG CTCTCTGAAT GATGTAATGC AGACTTTTCC AGAGTTCAAC TTCAAGCACC AAAATTATCC GAACTTGAGT TTAGATATAA AAACCAACAT TTTCCATTTA GGCTTGATTT TAGGCTTTTA TGACGATGAC CCTGAGATAC CTGTATTGCA TGGTGGATAT CTCATTCGAA GAGCTGGCAA GAAAAGAAGT TGGAAGCTTT TTGAGAAGCT TAGTAAGTTA AAAAACAATG ACAAAATTGC TCGAGACTTA TATGTAATGG GGCTTTTTAC AAAAAGCTTG AAAGATTCTG TTAGGTTGAG TGATTTATCA AAGACCTTCC ACAAGGTTGA ATCGGTATTA TTCAGAGAAG GACAAAACTT CACCACCTTG CTCGAACAAT CTAACCGCAT AATCGAAAAA AATAAGAATT TAAACGGTTC TGTGGATACG ATCACAAGAG GCTCTGTTCA AACAAAAGTT CAAGATGCTA TGTTTGTGTT TACACAGCTC ATGCTAAACA ATTCTCGCAT TAGAAATCCA CATACTTTTG CATATAAATC CATTACAGAT GTAAATCATG ATGTGATTCC AGCTATGTAT GACCTTCAGA TTAGTACTAA ACGCCCCGAA TTCTCAGAGA AATTTATAAA GAAAGCTTTG GCTGTTGTTG GGCTTGAAGA TATGTCATTT TCCCCGCATA AAATAAGACA TTACATAAAT CATCATGCTA GTGAAAGCGG AATCCCTATA GAAATCATTA ACTTGTGGTC TGGTCGTAAG GATGCCGATC AAGCTTATGA ATATATCCAT ACTACAGATG AAGATAATGC AGAAATAATA AGAACCGCTT TAGTTAAGAC AGAAGGTTTT GAGGCTTCAG AAGCAAAAGA GATTAAGTTA ATAAGTCTAG AGAAACTTCA AGAATTAAGA AAATTACCTG CCGCTGTAAT GTCAGAAGGA GTTTGTATTC AAGACTTAGC AACCATGCCT TGTCGATACT TGAATGACTT TATGACAAGT TGTTTCGGCT GCTCGCAAAT GTGTTATATC AAAGGGGATG GGAAAGTTTT AGGTACTTTG AATAAGGATT TAGGGATTCA AGTGGCCAGA CTAAGGAATG TAGAATCTCA ACCTGGCTTT ACAAACAATA AAGCTTCTCA AAAATGGTAT GAAATACACT TTAGTAGAAC TTCGGTCCTC AAGTCCTTGA TTGATATTCT TTCTGATGAC AGTATTCCAA ATGGTTCAAG CGTAAAAATA GTTGGCGATT TATCTTCATC TACAATAAGC TTTAAAACTC AGAATCTGGA CACCGGAGAA GTGACCACTA AGCAAGTTCT ACTTCAAGAT AGTACAAAAG AGCTAAAAAC GCTAATTGAT AATGAAGAGT TAAAATCCAA GAAAGAGACT GGTAATTCAA ATCCAGCTTT AACGGACCTA TTAGCCAGCT ATGGAGTTGC TAATGGCTAA
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Protein sequence | MINKHKKNAL NLVRKTKVAF DKTTPMLKLN ANTDQAAKWN EDWRSFHQGL PIKFYFQKWA TNSDSSNLDL ARVYAIESLA TNKGIKNITS TLRYATRALG ELTKDISELE QSDFDNLSKA FNKKGFSETH ASIFWTWCKK CELIPEYLST PSKSDSRDRS AGEAEKRRKK KLLDDEQVAA IGVAYNELFS DDGLKKYSFR EYSKEYFTLA FLTLSASSPS RMDSEIFALP EQKLKTHIDE DGVETHSLFW KGSKGHEDNR THILGALKDH VEKVIEVVGK ESLPAKILSW FMSRPDSSLN DVMQTFPEFN FKHQNYPNLS LDIKTNIFHL GLILGFYDDD PEIPVLHGGY LIRRAGKKRS WKLFEKLSKL KNNDKIARDL YVMGLFTKSL KDSVRLSDLS KTFHKVESVL FREGQNFTTL LEQSNRIIEK NKNLNGSVDT ITRGSVQTKV QDAMFVFTQL MLNNSRIRNP HTFAYKSITD VNHDVIPAMY DLQISTKRPE FSEKFIKKAL AVVGLEDMSF SPHKIRHYIN HHASESGIPI EIINLWSGRK DADQAYEYIH TTDEDNAEII RTALVKTEGF EASEAKEIKL ISLEKLQELR KLPAAVMSEG VCIQDLATMP CRYLNDFMTS CFGCSQMCYI KGDGKVLGTL NKDLGIQVAR LRNVESQPGF TNNKASQKWY EIHFSRTSVL KSLIDILSDD SIPNGSSVKI VGDLSSSTIS FKTQNLDTGE VTTKQVLLQD STKELKTLID NEELKSKKET GNSNPALTDL LASYGVANG
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