Gene Tcr_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0086 
Symbol 
ID3762220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp110878 
End bp113217 
Gene Length2340 bp 
Protein Length779 aa 
Translation table11 
GC content37% 
IMG OID637784791 
Producthypothetical protein 
Protein accessionYP_390356 
Protein GI78484431 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAATA AACACAAAAA AAATGCTCTT AACTTAGTCC GAAAAACAAA AGTAGCCTTC 
GACAAGACAA CTCCCATGTT GAAGCTAAAT GCAAATACCG ATCAGGCAGC AAAATGGAAC
GAAGACTGGC GATCTTTTCA CCAAGGTTTA CCTATTAAAT TCTATTTTCA GAAATGGGCT
ACAAACTCCG ATAGCTCCAA CCTTGACTTA GCGAGGGTCT ATGCAATCGA ATCTTTAGCT
ACAAACAAAG GAATAAAAAA TATTACATCA ACCCTCCGGT ATGCCACAAG AGCTTTAGGA
GAGTTAACTA AAGACATAAG CGAATTGGAG CAAAGTGATT TTGATAACCT GTCAAAGGCT
TTCAACAAAA AGGGGTTTTC TGAAACGCAT GCATCAATAT TTTGGACATG GTGCAAAAAA
TGCGAACTTA TCCCCGAATA CCTCTCGACA CCTTCAAAAT CTGACTCCAG GGATAGAAGT
GCGGGAGAGG CAGAAAAAAG AAGAAAGAAA AAGCTTTTAG ATGATGAACA AGTAGCAGCT
ATCGGAGTGG CTTACAACGA ACTATTTTCT GATGACGGTT TGAAGAAATA CAGCTTTCGA
GAATATTCAA AAGAGTATTT TACATTGGCT TTTTTGACGC TATCAGCATC AAGCCCTTCG
CGTATGGATT CAGAAATTTT TGCTCTTCCG GAGCAAAAAC TGAAGACACA TATTGATGAA
GACGGTGTTG AGACTCATAG CTTATTCTGG AAAGGATCAA AAGGCCACGA AGATAACCGT
ACGCACATTC TAGGGGCACT AAAAGACCAT GTTGAAAAGG TTATCGAAGT CGTCGGGAAG
GAATCCTTGC CAGCTAAAAT TTTATCGTGG TTTATGTCAA GGCCTGATAG CTCTCTGAAT
GATGTAATGC AGACTTTTCC AGAGTTCAAC TTCAAGCACC AAAATTATCC GAACTTGAGT
TTAGATATAA AAACCAACAT TTTCCATTTA GGCTTGATTT TAGGCTTTTA TGACGATGAC
CCTGAGATAC CTGTATTGCA TGGTGGATAT CTCATTCGAA GAGCTGGCAA GAAAAGAAGT
TGGAAGCTTT TTGAGAAGCT TAGTAAGTTA AAAAACAATG ACAAAATTGC TCGAGACTTA
TATGTAATGG GGCTTTTTAC AAAAAGCTTG AAAGATTCTG TTAGGTTGAG TGATTTATCA
AAGACCTTCC ACAAGGTTGA ATCGGTATTA TTCAGAGAAG GACAAAACTT CACCACCTTG
CTCGAACAAT CTAACCGCAT AATCGAAAAA AATAAGAATT TAAACGGTTC TGTGGATACG
ATCACAAGAG GCTCTGTTCA AACAAAAGTT CAAGATGCTA TGTTTGTGTT TACACAGCTC
ATGCTAAACA ATTCTCGCAT TAGAAATCCA CATACTTTTG CATATAAATC CATTACAGAT
GTAAATCATG ATGTGATTCC AGCTATGTAT GACCTTCAGA TTAGTACTAA ACGCCCCGAA
TTCTCAGAGA AATTTATAAA GAAAGCTTTG GCTGTTGTTG GGCTTGAAGA TATGTCATTT
TCCCCGCATA AAATAAGACA TTACATAAAT CATCATGCTA GTGAAAGCGG AATCCCTATA
GAAATCATTA ACTTGTGGTC TGGTCGTAAG GATGCCGATC AAGCTTATGA ATATATCCAT
ACTACAGATG AAGATAATGC AGAAATAATA AGAACCGCTT TAGTTAAGAC AGAAGGTTTT
GAGGCTTCAG AAGCAAAAGA GATTAAGTTA ATAAGTCTAG AGAAACTTCA AGAATTAAGA
AAATTACCTG CCGCTGTAAT GTCAGAAGGA GTTTGTATTC AAGACTTAGC AACCATGCCT
TGTCGATACT TGAATGACTT TATGACAAGT TGTTTCGGCT GCTCGCAAAT GTGTTATATC
AAAGGGGATG GGAAAGTTTT AGGTACTTTG AATAAGGATT TAGGGATTCA AGTGGCCAGA
CTAAGGAATG TAGAATCTCA ACCTGGCTTT ACAAACAATA AAGCTTCTCA AAAATGGTAT
GAAATACACT TTAGTAGAAC TTCGGTCCTC AAGTCCTTGA TTGATATTCT TTCTGATGAC
AGTATTCCAA ATGGTTCAAG CGTAAAAATA GTTGGCGATT TATCTTCATC TACAATAAGC
TTTAAAACTC AGAATCTGGA CACCGGAGAA GTGACCACTA AGCAAGTTCT ACTTCAAGAT
AGTACAAAAG AGCTAAAAAC GCTAATTGAT AATGAAGAGT TAAAATCCAA GAAAGAGACT
GGTAATTCAA ATCCAGCTTT AACGGACCTA TTAGCCAGCT ATGGAGTTGC TAATGGCTAA
 
Protein sequence
MINKHKKNAL NLVRKTKVAF DKTTPMLKLN ANTDQAAKWN EDWRSFHQGL PIKFYFQKWA 
TNSDSSNLDL ARVYAIESLA TNKGIKNITS TLRYATRALG ELTKDISELE QSDFDNLSKA
FNKKGFSETH ASIFWTWCKK CELIPEYLST PSKSDSRDRS AGEAEKRRKK KLLDDEQVAA
IGVAYNELFS DDGLKKYSFR EYSKEYFTLA FLTLSASSPS RMDSEIFALP EQKLKTHIDE
DGVETHSLFW KGSKGHEDNR THILGALKDH VEKVIEVVGK ESLPAKILSW FMSRPDSSLN
DVMQTFPEFN FKHQNYPNLS LDIKTNIFHL GLILGFYDDD PEIPVLHGGY LIRRAGKKRS
WKLFEKLSKL KNNDKIARDL YVMGLFTKSL KDSVRLSDLS KTFHKVESVL FREGQNFTTL
LEQSNRIIEK NKNLNGSVDT ITRGSVQTKV QDAMFVFTQL MLNNSRIRNP HTFAYKSITD
VNHDVIPAMY DLQISTKRPE FSEKFIKKAL AVVGLEDMSF SPHKIRHYIN HHASESGIPI
EIINLWSGRK DADQAYEYIH TTDEDNAEII RTALVKTEGF EASEAKEIKL ISLEKLQELR
KLPAAVMSEG VCIQDLATMP CRYLNDFMTS CFGCSQMCYI KGDGKVLGTL NKDLGIQVAR
LRNVESQPGF TNNKASQKWY EIHFSRTSVL KSLIDILSDD SIPNGSSVKI VGDLSSSTIS
FKTQNLDTGE VTTKQVLLQD STKELKTLID NEELKSKKET GNSNPALTDL LASYGVANG