| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2823 |
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| Symbol | |
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| ID | 3672974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2904568 |
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| End bp | 2905890 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637711531 |
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| Product | putative phage integrase |
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| Protein accession | YP_316581 |
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| Protein GI | 74318841 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.339344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTGT CGGATAGCAA GCTGCGGACA CTGAAACCGG CGGACAGGGT GTTCAGCGAA
TCAGACGGGG GCGGGCTGTA TATTGAAATC ATGCCGACCG GGAAAAGGCG GTGGGGTTTG
AAATATCGAA TCCCGACCGG AAAGCAGGAA ACAATCCGCC TTGGTGACTA TCCGGCCTAT
TCGCTGGCCG ATGCCCGGAC ATGGCGTGAC GATTGCAAGG CGCTGGCCGG ACGCGGCTTG
TCACCTATGG CCCTGAAGCG CGGCGACCCG ATCCCCGAGG ATGCAGCACC AGCGGCAAAG
GAACTGGCGC AATTCTTCAT CCGCAATTGG TGCATGAAGG CCGTCGAAAA AGCCAAGGCA
AAAGAGGCCG AGGCCAAAGC CGCCGACACC GTGGAAGCAT TCGCCTGGCG CTGGTATGCC
GAGATTGTCG AGCCAGCGAA CAGCAACCCG CGCAACATCA AACGCATTCT TGATAAGGAC
GCGATCCCGG CAATTGGCAG CAAGCAAATC GCCGACGTGA CCGTGACCGA CATTCTGGCG
ATTACCGACA AGATCAAGAA TCGCGGGGCC GATCAAATGG CGCTGCAAAC CCGCAACGTG
CTGAAGCGGC TTTTTGCCTA CGCTATCGCG CGCGAGAAAA CGACCTTCAA CCCGGCGGCA
GCCATCGAGG CGAAATTTAT TGCTCAAGCC AAGAGCCGCG ACGTGGCGCT GTCGCCGGAA
GAAATCGGGC GGCTGTTGCG GGCGATCTAC CAATCCAGCA TGAAGCGGGC GCACAAACTG
GCGCTGCACC TGCTGATTCT TTGCATGGTG CGGAAGTCGG AACTGACCGA AGCCAAGTGG
GAAGAGCTTG ATCTTGAAAA GGCCGAATGG GCGATCCCCG GCGAGCGCAT GAAGAAAGAC
AAGCCGCACC TTGTCCCGCT GTCCCGGCAA GCCGTGGCGA TGTTCGAGGA ATTGAAGGGG
CTGGCGAGCG GTTCCGAATG GGTATTCCCC AGCCGTAGCA GTCTGAAAAA GCCCATCGCC
CATAACGCCT TGAATACCGT GGTGCGGGCG CTGGAAGCCG ACGTGCGGGA CTTCGTAATT
CACGACTTCC GGCGGACAGC CTCAACGCAC TTGCACGAAG CCGGGTTTAA TTCGGACTGG
ATCGAAAAGG CGCTGGCCCA TGAAACCAAG GGCATTCGCG GCGTCTACAA CCGGGCGCAA
TATGCTGACC AGCGGCGGGA CATGCTGCAA TGGTGGGCCG ACTTCGTGGA CAGCCAGATT
CAGGACGGAC GCGGCAAGGT AATCATCGGG CCGTTCGGTA AGGCATACCA GTCGGCGGCG
TAA
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| Protein sequence | MALSDSKLRT LKPADRVFSE SDGGGLYIEI MPTGKRRWGL KYRIPTGKQE TIRLGDYPAY
SLADARTWRD DCKALAGRGL SPMALKRGDP IPEDAAPAAK ELAQFFIRNW CMKAVEKAKA
KEAEAKAADT VEAFAWRWYA EIVEPANSNP RNIKRILDKD AIPAIGSKQI ADVTVTDILA
ITDKIKNRGA DQMALQTRNV LKRLFAYAIA REKTTFNPAA AIEAKFIAQA KSRDVALSPE
EIGRLLRAIY QSSMKRAHKL ALHLLILCMV RKSELTEAKW EELDLEKAEW AIPGERMKKD
KPHLVPLSRQ AVAMFEELKG LASGSEWVFP SRSSLKKPIA HNALNTVVRA LEADVRDFVI
HDFRRTASTH LHEAGFNSDW IEKALAHETK GIRGVYNRAQ YADQRRDMLQ WWADFVDSQI
QDGRGKVIIG PFGKAYQSAA
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