| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2171 |
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| Symbol | |
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| ID | 3671952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2255712 |
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| End bp | 2257742 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637710875 |
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| Product | anaerobic ribonucleoside triphosphate reductase |
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| Protein accession | YP_315929 |
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| Protein GI | 74318189 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00664522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00155539 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGGATA GAGGTCGCGA CACGGTTACG GTTTCAGCGC TGCGCGAGGT GCTCAAGCGC
GACGGGCGGC GGGCGCCCTT CGACGCCGGA AAGATTCGCT CGGCGCTCCT GCGCGCGGGG
CAGGCGAGCG GCGAATTCGG CGGCGACGAA GCCGACCTGC TGACCGCCCA GGTGGTCAAG
GTGCTCGCGC ACAGCTTCCG CAACACCCCG CCCGACATCG AGCGCATCCA GGACGTCGTC
GAGCAGAGCC TGATCGCATC CAACCATTTC CAGACCGCGC GCGCCTACAT CGCCTACCGC
GAAAGCCACA AGAAGCTGCG CGAGGACCGC AAGACCGTCG TCGACGTCGA AGCGTCCATC
AACGAGTACC TCTCGCGCCA GGACTGGCGC GTCAACGCCA ACGCCAACCA GGGCTACTCG
CTCGGCGGCC TGATCCTCAA CGTCTCGGGC AAGGTCGTCG CGAACTACTG GCTCAACCAC
GTCTATCCGC CCGAGCTTGG CGAAGCCCAC CGCGACGGCT CGATCCACGT CCACGACCTC
GACATGCTGG CCGGCTACTG CGCCGGCTGG TCGCTGCGCA CGCTACTCCA CGAGGGCTTG
AACGGTGTGC CCGGCAAGGT CGAGGCGGGG CCGCCCAAGC ACATGTCGTC CGCTGTCGGG
CAGATCGTCA ATTTTCTCGG CACGCTGCAG AACGAGTGGG CCGGCGCGCA GGCGTTCTCG
TCCTTCGACA CCTACATGGC GCCCTTCATC CGCAATGACC GGATGAGTTA CGCAGAGGTT
CGCCAGTGCA TCCAGGAATT GATCTACAAC CTCAACGTGC CGTCGCGCTG GGGTACGCAG
ACGCCGTTCA CCAACCTGAC CTTCGACTGG ACCTGCCCGG AGGATCTGCG CGAGCAGGTG
CCGGTGATCG GCGGCAAGGA AATGCCCTTC ACCTACGGCG AGCTGCAGGT CGAGATGGAC
ATGATCAACC GCGCCTACAT CGAGGTCATG ACGACCGGCG ACGCCAAGGG CCGCGTCTTC
ACCTTCCCGA TCCCGACCTA CAACATGACG CCGGACTTTC CCTGGGAATC GGAAAACGCC
GGCCGCCTGT TCGCGATGAC GGCACGCTAC GGCCTGCCGT ACTTCCAGAA TTTCATCAAT
TCGGAAATGA AGCCGAACCA CATCCGCTCG ATGTGCTGCC GCCTGCAGCT CGACCTGCGC
GAACTCCTCA AGCGTGGAAA CGGCCTCTTC GGCTCGGCCG AGCAGACCGG ATCGGTCGGT
GTCGTCACGG TCAACTGCGC GCGCCTGGGC TACGAGTACA AAGGCGACGA GGCGGGCCTG
CTGCGCCGTC TCGACGCCTT GCTCGACATG GCGAGGAACG GCCTCGAGAT CAAGCGCAAG
GAAATCCAGC GCCTGATGGA CAACGGCCTC TTCCCCTACA CCAAGCGTTA TCTCGGCACG
CTGCGCAATC ACTTCTCGAC TGTCGGCGTC AACGGCGTCA ATGAGATGAT CCGCAACTTC
ACCGCGGATG AGCACGACAT CACCACGGTA TGGGGCCACG ACTTCGCGGT GCGCCTGCTC
GACCACATCC GTGGCCGGAT CGCGGCCTTC CAGGAAGAGA CCGGCCACAT GTACAACCTC
GAGGCGACGC CGGCCGAAGG CACGACCTAC CGCTTCGCGA AGGAAGACGC CAAGCGCTAT
CCGGGCATCC TGCAGGCCGG CGCCGAGGGC GCGCCGTATT ACACCAACTC GACGCAGCTT
CCGGTCGGCT TCACCGACGA CGCGTTCGAG GCGCTCGAGC GCCAGGACGA GCTGCAGCGC
AAGTACACCG GCGGCACCGT GCTGCATCTC TACATGTCGG AGCACATCTC GTCGGCCGAG
GCGTGCAAGA ACCTCGTGCG CCGCTCGCTC GAGCGCTTCA GCCTGCCCTA CATCACGATC
ACGCCCACTT TCTCGATCTG TCCCAAACAT GGCTACCTCG CCGGCGAACA CGAGTTCTGT
CCGAAGTGCG ACGAGGAAGC CCTGTCGCGC AAGCGTGTTG TTTCAGCCTA A
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| Protein sequence | MTDRGRDTVT VSALREVLKR DGRRAPFDAG KIRSALLRAG QASGEFGGDE ADLLTAQVVK
VLAHSFRNTP PDIERIQDVV EQSLIASNHF QTARAYIAYR ESHKKLREDR KTVVDVEASI
NEYLSRQDWR VNANANQGYS LGGLILNVSG KVVANYWLNH VYPPELGEAH RDGSIHVHDL
DMLAGYCAGW SLRTLLHEGL NGVPGKVEAG PPKHMSSAVG QIVNFLGTLQ NEWAGAQAFS
SFDTYMAPFI RNDRMSYAEV RQCIQELIYN LNVPSRWGTQ TPFTNLTFDW TCPEDLREQV
PVIGGKEMPF TYGELQVEMD MINRAYIEVM TTGDAKGRVF TFPIPTYNMT PDFPWESENA
GRLFAMTARY GLPYFQNFIN SEMKPNHIRS MCCRLQLDLR ELLKRGNGLF GSAEQTGSVG
VVTVNCARLG YEYKGDEAGL LRRLDALLDM ARNGLEIKRK EIQRLMDNGL FPYTKRYLGT
LRNHFSTVGV NGVNEMIRNF TADEHDITTV WGHDFAVRLL DHIRGRIAAF QEETGHMYNL
EATPAEGTTY RFAKEDAKRY PGILQAGAEG APYYTNSTQL PVGFTDDAFE ALERQDELQR
KYTGGTVLHL YMSEHISSAE ACKNLVRRSL ERFSLPYITI TPTFSICPKH GYLAGEHEFC
PKCDEEALSR KRVVSA
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