Gene Tbd_1510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1510 
Symbol 
ID3672923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1598241 
End bp1598846 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content65% 
IMG OID637710195 
ProductexbB-like biopolymer transport 
Protein accessionYP_315268 
Protein GI74317528 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.232406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.284557 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTGCCA TCATCGAGGC GGCCGGCTGG CCGGTCTGGC CGTTGATTCT GGCGTCGGTA 
ATCGCCGTGG CCATCATCAT CGAACGCGCC TACAGCCTGC GCACCCGGGA AGTCGCGCCC
GCGGGCCTGT TGCTGGAGAC CATCAAGGTG TACCAGGAAC GCGGCGTTTC GACCGAGCTC
GTCAGCCACC TGGCCGACAA TTCGCCGCTC GGCCGTATCT TCGCGACCGC CCTGAGGAAC
GCCAACAACT CCCGCGAAAT CATGAAAGAG TCAATCGAGG AGGCGGGCCG CGCCGTGACC
CACGACCTCG ACCGTTTCCT GACCTCGCTC GGCACGATCG CGAGCATGGC GCCCTTGCTC
GGGCTGCTCG GCACGGTGAT CGGCATGATC GAGATCTTCG GCGCGCAGAC CGGCGGTGCC
GCGAATCCCG GGCAGCTCGC CCATGGCATT TCGATCGCGC TGTACAACAC GGCCTTCGGC
CTGATCGTCG CCATCCCGGC GATGATCTTC TACCGCTATT TCCGCTCGCG CGTCGAGTCG
CTCGTCGTCG ACATGGAGCA GCAGGCGATC AAGCTCGTGG AAATCGTCCA CGGTGACCGA
AAGTAA
 
Protein sequence
MLAIIEAAGW PVWPLILASV IAVAIIIERA YSLRTREVAP AGLLLETIKV YQERGVSTEL 
VSHLADNSPL GRIFATALRN ANNSREIMKE SIEEAGRAVT HDLDRFLTSL GTIASMAPLL
GLLGTVIGMI EIFGAQTGGA ANPGQLAHGI SIALYNTAFG LIVAIPAMIF YRYFRSRVES
LVVDMEQQAI KLVEIVHGDR K