Gene Tbd_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1287 
Symbol 
ID3673377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1355283 
End bp1355981 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content69% 
IMG OID637709972 
Producttwo component transcriptional regulator 
Protein accessionYP_315045 
Protein GI74317305 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAGCA AGCGCATTTT AGTAGTGGAC GACGACCAGG AACTGCTCGA CATGGTCTGC 
CGTTACCTCG GTGAAAACGG CCTCGACGCC CACGCGGCGG CCGACAGCGT GCACATGGAC
GCCTGGCTGG CGAGCAGCAG GCCTGACCTG ATCGTGCTCG ACGTGATGCT CCCCGGCGAA
GATGGCCTCT CGGTCGTGAA GCGGCTCAAG TCGCGGCTCG ACGTCCCGGT CCTGATGCTC
TCGGCGCGCA GCTCGGACGT CGACCGCATA CTCGGCCTGG AAATGGGCGC CGACGACTAC
CTGACCAAGC CGTTCCACCC GCGCGAGCTG CTCGCCCGCA TCCATGCGCG CCTGCGCAGG
TCGCCCGCCC CGCGGCAGGA AGACGCGCTC GAGGCGGGGT CTTTCCGCCT CGATTTCGTG
CGGCGTGACG CCTACAAGCA CGGCCAGCCA CTCGCGCTGT CGACCGCGGA CTTCTCGCTG
CTGTCGCTCC TGATGCGGCA TAGCCACCGG GTTCTCGACC GCACCCAGCT CGTCGACCTG
GCGTCGGCGA TGGAGCGCAT GCCGTTCAAC CGCTCGATCG ACGTCCGCGT CGCGCGGCTG
CGCCGCAAGA TCGAGGACGA CCCGGCGCAG CCGCGCTACA TCCGCACCGT GCGCGGCAGC
GGCTACCTGT TCGTGCCCGA CGGTGGCGAC GAGCGGTGA
 
Protein sequence
MESKRILVVD DDQELLDMVC RYLGENGLDA HAAADSVHMD AWLASSRPDL IVLDVMLPGE 
DGLSVVKRLK SRLDVPVLML SARSSDVDRI LGLEMGADDY LTKPFHPREL LARIHARLRR
SPAPRQEDAL EAGSFRLDFV RRDAYKHGQP LALSTADFSL LSLLMRHSHR VLDRTQLVDL
ASAMERMPFN RSIDVRVARL RRKIEDDPAQ PRYIRTVRGS GYLFVPDGGD ER