| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0994 |
|---|
| Symbol | |
|---|
| ID | 3671217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 1059339 |
|---|
| End bp | 1061018 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637709675 |
|---|
| Product | 2-octaprenylphenol hydroxylase |
|---|
| Protein accession | YP_314752 |
|---|
| Protein GI | 74317012 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0661] Predicted unusual protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.380493 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.425074 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTGGG AAACCCTCTC GGTCGTTCGC GACCTGCCGC GCCTGCACGA AATTGCCTCG
GTGATGATTC GCTACGGCTG GGGCGATCTG GTACGCGTGC TCGGCATCAA CGGCGCGCTC
GAACGCGCCG GCCGCGTGCT GCACTGGCAC AGCACGAGCG AGATCAGTCA ACTCGACGCG
CCGGTCCGCG TACGCCGCGC GCTCGAGGAA CTCGGGCCGA CTTTCGTCAA GCTCGGACAG
GTGCTGGCGA CGCGCGTCGA CATGTTCCCG CCGAACTGGA TCGCGGAATT CGAGAAACTG
CACAGCCAGG TGCCCGCGCA GAGTTACGAG GTGATGTACC CCGAACTGGT CGCCGCGATC
GGCGGCGAGC CCGGCGAGGT GTTCGCCGCC TTCGACCCGG TGCCACTCGC CGCGGCGTCG
ATCGCCCAGG TGTACCGCGC GACGCTCAAG GACGGCACGC CGGTCGTCGT GAAAATGCGC
CGCCCGGGCA TCGAGACGGT GATCCGCGCC GATCTGCGCA TCCTCGACCA TGCGGCGCGG
CTGCTCGAGA GCGAGGTCGC CGACGCACGC CGCTACGACC CGGTGCAGAT CGTGTCGCAG
TTCAGGCGCT CGCTCAGCCG CGAATTGGAT CTCGCCAAGG AGGCGCGCAA CATCGACCAG
TTCGCGCGTC ATTTCGCGAC CGACCCGCTG GTCAAGATTC CGAAGGTCTA CTGGGAATTC
ACCAACGACC AGGTCAACGT CCAGGAGGAG ATCGTCGGCC TTGCCGGCGT TTCCCCCGAC
AAGCTGCGCG CGGCGGGTCT CGACCCCAAG CTCCTCGCCG CGCGCGGCGC CAACGCCGTG
CTGTCGATGG TATTGCTGCA CGGCTATTTC CACGCCGACC CGCACCCCGG CAACGTCCTC
TTCCTGCCCG GCAACCGGAT CGGCATGATC GATTTCGGCA TGGTCGGGAT GCTGACCGAG
CCGCGCCGCA ACCAGATCGT CGACCTGCTG CATGCGCTGA CCCGACGCGA CGAACAGGCG
CTGCTGCAGG TGCTGCTCGA CTGGAGCGGG GACTCGGTTC CCGACGACGA GCGTCTCGCC
TACGACGTCG CCGAGCTCAT GCAAAGCTAC GACGACCTGC AGCTCAAGGA CGTCAAGATC
GGCGCCCTGC TGAATGACAT CACCGCCTTG ATGCGCGACA ACAACCTCGT GCTGCCGGCC
GACCTGACCT TGCTCTTCAA GACCCTGATC ACACTCGAGG GCCTCGGACA GCAGCTCGAT
CCCGAGTTCC ACATGATCGA CAACGTGACG CCGTTCGTCG AAAGCGTGAT CAAGGAGCGC
TATACGCCGC AGGCCCTGTT CGTGCGCGGA CGCAAGAGCG TGCGCGAGGC GCTCGAAGTG
GCGGCCGATT TGCCGCGCGA TCTGCGGCAC CTGTTGCGTG ACATGCGGCG CGGCCGCGTC
AAGGTCGATT TCGACCTCAA GCGCCTCGAC CATTTCGGTC ACCAACTCGA CAGTGCCGCG
AGCAGGCTGA CGATGGGCAT TCTGACCGCT TCGCTCGTCG TCGGGTCGAG CATCATCATG
ACGGTCAAGG GTGGTCCGGA GCTGTTCGGG CTGCCGTTCT TCGGGCTGGT CGGGTTTCTG
ATCGCGTTTT TCAACAGCGT GTGGATCGTG CTGTCGATCT GGCGTTCAGG GAAGCACTGA
|
|---|
| Protein sequence | MLWETLSVVR DLPRLHEIAS VMIRYGWGDL VRVLGINGAL ERAGRVLHWH STSEISQLDA
PVRVRRALEE LGPTFVKLGQ VLATRVDMFP PNWIAEFEKL HSQVPAQSYE VMYPELVAAI
GGEPGEVFAA FDPVPLAAAS IAQVYRATLK DGTPVVVKMR RPGIETVIRA DLRILDHAAR
LLESEVADAR RYDPVQIVSQ FRRSLSRELD LAKEARNIDQ FARHFATDPL VKIPKVYWEF
TNDQVNVQEE IVGLAGVSPD KLRAAGLDPK LLAARGANAV LSMVLLHGYF HADPHPGNVL
FLPGNRIGMI DFGMVGMLTE PRRNQIVDLL HALTRRDEQA LLQVLLDWSG DSVPDDERLA
YDVAELMQSY DDLQLKDVKI GALLNDITAL MRDNNLVLPA DLTLLFKTLI TLEGLGQQLD
PEFHMIDNVT PFVESVIKER YTPQALFVRG RKSVREALEV AADLPRDLRH LLRDMRRGRV
KVDFDLKRLD HFGHQLDSAA SRLTMGILTA SLVVGSSIIM TVKGGPELFG LPFFGLVGFL
IAFFNSVWIV LSIWRSGKH
|
|---|
| |