| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0825 |
|---|
| Symbol | |
|---|
| ID | 3673522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 866976 |
|---|
| End bp | 869000 |
|---|
| Gene Length | 2025 bp |
|---|
| Protein Length | 674 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637709503 |
|---|
| Product | nitric oxide reductase activase protein |
|---|
| Protein accession | YP_314583 |
|---|
| Protein GI | 74316843 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4548] Nitric oxide reductase activation protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.451529 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAGG CGGAAGAACT CATCATCGAT GCCGCGCGCC ATGCCGGCAC CGCGGTGCAC
GGATTCTGGC GGCGCCGCCA CGCCCCGCCG CCGACGCCGA CGGTATTCCT GCGCGACGTG
CGCACGCGCC TCGAGATGCT GATCGACGCC GTGCTCGGTT GCGAGCTGCC GGTGCGGGCG
GCGCAGGCGG CCGCGCCGAT GCCGCTTCTG CGCAGGCTGT TCACGCGCGG TGGACGGAAG
ACGGCGGCCG CCGGACCGCT TCCGGCGACC GACGGCACGG CGGTTTTCCT GCCGCCGAGC
CTTCCCGTAT CGCCGCCGGC GTCGGCGGCG TTCACCGACG ACTACTGCCT GCTCGCGCTG
CTGCAGGCGC TGCATCACCT GCGCGGAAGC GCAGGCGAAA TCGCGCGCCT GGAGTCGGAC
CTCGCGCGCG ACCTGTACCT GATCGCCGAA GCCGCGGCGG TCGACCACCG GCTGCGCCGG
CTCATGCCGG GATGGTCGCA GGCGCTCGAC GCGCTTTACG TGCGGATGGA CCGCGCGCTT
GCGCAGCGCC GCCTGCGGGA CGCGCTCGAG GCCGACGTCG CGGCGCGTTA CCGGAATTTC
CTGCGTGGCC GCGCGGGCGC GGAAACGCTG CACGCGAATC CGGCCGCGGC GCTCGACTGG
GCGAATGCAC AGGCGCGCGC CCTGCGTCTG CGCGTGCCTG CCAGGCGCTA TGTCGCCTGG
CTCGGCGACC TCGTCGTCGG CCGCCTGCTG CCACCCGAAG GCGCGCCGCG GGCGCGTGTG
CGCGCATCCT CGAAGGCGGC GGCGGCCGCG GACGCGCGGG CCGGCGCGCG CACGGCCTCG
CTCGTGCGGC GTCCGCGCGT GCGCGACGGC CGCGACGAGG ACGATGCGAA ACCGGGCGTA
TCGATGGTCC AGACCTCCGA GCCGCATCCG CACGCCGAGG ATCCCTTCGG CCTCAACCGT
CCGGAAGACC AGGAGCCGGA AGACGACTTG GGGGGCGCGG CGGAGTCGCT GGCCGAAATG
GAAGAGGCGC GGCTGGTCCA CAGCCCCGGC GCTGCGCGCG AAGCCTTCGA GGCAAGCGAT
CCGCCGCCAC GGCTCGAAAG CGCGGCGGAC ACCGCACTGC CGCCCTGTGC ATTCAGCTAC
CCGGAATGGG ATTGCCGCAC GAGTCGTTAC CGTGAAAACG CTGTTGCACT TTTCTCGCAT
CCGGCGAAAC CGGGCGGCGC GAAATGGGTC GCCGACGCGT TGCAGCGCAA CGCCGGCCTG
CTCGCACAGA TCCGCCGGCG GCTCGGCGCG ATTCGTCCCG ACCGCACGAT CCTGCGCGGG
CAGACCGCGG GGGACGAGAT CGACCTCGAC GCGGTCGTCG CCGCGCGGGG CGAGCGCCGG
GCCGGCGCGA CAGGCGACGC GCGCTTCTAC CGCTCCCGTC GTCCGGCGCC GCGCACGCTC
GCGCTTGTGC TCCTGGTCGA CGCGAGCGCG TCGACCGACG CATGGGTGAC GCGCAAGGAC
CGCGTCATCG ACATCGAGAA GGAGGCGGCG CTGCTCGCCG CGGCGGGGCT CGAGACCTTG
CGAACGCGCT TCGCGGTGCT CGCGTTTTCG GGCGAAGGCC CGGCCGGCGT GCAGATACGC
GAGATCAAGC GTTTCGACGA GACCTGGGAT GCAAGCGCAC AGCGTCGCCT CGCCGGCCTC
GAGCCCGACC GCTACACCCG GCTCGGCGCC GCCCTACGCC ACGCCAACGC CTTGCTCGCG
GCGTGCGCGG CTGACCACCG GCTGTTGCTA CTTTTGTCGG ACGGGCGGCC CAACGACTGC
GACCGCTACG CGAGCCGCTA CGGCATCGAA GACGCGCGCC AAGCGCTCAC CGAGGCGCGG
CTCAAGCGCA TTTCGCCCTA CTGCTTCACG GTCGACCGCG CCGGCGGCAG TTATCTGCCG
ACGATTTTCG GCAGCGAGGG CTACACAGTG GTGCAGCACC CGCAACAGCT GCCGGTCGCG
TTCATCAACT GGCTGCGGCG CGCGGCGCGC GTGTGCATGC GCTAG
|
|---|
| Protein sequence | MPEAEELIID AARHAGTAVH GFWRRRHAPP PTPTVFLRDV RTRLEMLIDA VLGCELPVRA
AQAAAPMPLL RRLFTRGGRK TAAAGPLPAT DGTAVFLPPS LPVSPPASAA FTDDYCLLAL
LQALHHLRGS AGEIARLESD LARDLYLIAE AAAVDHRLRR LMPGWSQALD ALYVRMDRAL
AQRRLRDALE ADVAARYRNF LRGRAGAETL HANPAAALDW ANAQARALRL RVPARRYVAW
LGDLVVGRLL PPEGAPRARV RASSKAAAAA DARAGARTAS LVRRPRVRDG RDEDDAKPGV
SMVQTSEPHP HAEDPFGLNR PEDQEPEDDL GGAAESLAEM EEARLVHSPG AAREAFEASD
PPPRLESAAD TALPPCAFSY PEWDCRTSRY RENAVALFSH PAKPGGAKWV ADALQRNAGL
LAQIRRRLGA IRPDRTILRG QTAGDEIDLD AVVAARGERR AGATGDARFY RSRRPAPRTL
ALVLLVDASA STDAWVTRKD RVIDIEKEAA LLAAAGLETL RTRFAVLAFS GEGPAGVQIR
EIKRFDETWD ASAQRRLAGL EPDRYTRLGA ALRHANALLA ACAADHRLLL LLSDGRPNDC
DRYASRYGIE DARQALTEAR LKRISPYCFT VDRAGGSYLP TIFGSEGYTV VQHPQQLPVA
FINWLRRAAR VCMR
|
|---|
| |