| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0077 |
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| Symbol | |
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| ID | 3673276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 78456 |
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| End bp | 80183 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637708736 |
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| Product | nitrite reductase (NO-forming) |
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| Protein accession | YP_313835 |
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| Protein GI | 74316095 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.157876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.459085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACGA GGCTCAGTAT TCTGGCCGCA AGTATTTTTC TCATGGGTGC GACGCAGGCG
ATAGCCGCCG ACGCACCGCC GTCCGGGCAC CCGGGCACGC CCGATCCGGA GCTGCGCTAC
AAGGGCGCGC CGGTGCCGAT CAAGCCCGAA GAAGCCCAGG AAACGATCAC CCCGAAGGCG
CCGCCCGTCA CGGCCGCCGA ATTCGCCCGT GCCAAGCAGA TCTACTTCGA GCGCTGCGCC
GGATGCCACG GCGTCCTGCG CAAGGGCGCG ACCGGCAAGC CGCTCACCCC CGACGTCACC
CTGCCGCGCG GAACCGAGTA CCTGAAAGTG TTCATCGGCT TCGGCTCGCC CGGCGGCATG
CCGAACTGGG GCAGCTCCGG CATACTGAGC GACGCCGAAA TCGACATCAT GGCGCGCTTC
CTGCAGCACG AACCGCCGAT GCCGCCCGAA TACGGCCTGG CCGAAATGAA GGCCACCTGG
AAGCTGAAGG TGCCGCCTGA AAAACGCCCC AAGAAGAAGA TGAACAAGCT GGATCTGGAG
AACCTCTTCT CCGTGACCCT GCGCGACGAC GGCAAGATCG CGCTGATCGA CGGAGACAGC
AAGAAGATCG TCTCCACCAT CGAAACCGGC TATGCCGTGC ACATCTCGCG CATGTCGGCG
TCCGGACGCT ATCTTTTCGT CATCGGCCGC GACGCCAAGA TCGACCTCAT CGACCTGTGG
ATGAAAGAGC CGGCGGTGGT GGCCGAGATC AAGGTGGGCA TGGAAGCGCG CTCGGTCGAA
ACCTCCAAGT ACAAGGGCTA CGAGGACAAG TACGCGGTCG CCGGCACCTA CTGGCCGCCG
CAATTCGTGA TCATGGACGG CGACACGCTG GAACCGAAAA AGATCGTCGC CACCCGCGGC
ATGACCGTGG ACACCCAGGA ATATCACCCG GAGCCGCGCG TCGCCGCGAT CATCGCCTCG
CATGAGCATC CCGAGTTCAT CGTCAACGTC AAGGAGACCG GCAAGGTCCT GATGGCCAAC
TACGAGGACA TCAACAACCT GAAGGTGACC GAGATCGAAG CGGCGCGCTT CCTCCACGAC
GGCGGCTGGG ATTCCACGCA CCGCTACTTC ATGTCGGCGG CCAACGCCTC CAACAAGATC
GCCGTGGTCG ACTCGAAGAA GCAGAAACTG ACAGCGCTGG TGGAAGTGGG CAAGATCCCC
CACCCCGGAC GCGGCGCAAA CTTTGTCGAC CCGAAATTCG GGCCGGTATG GGCCACCGGC
CACCTCGGCG ACGACAGCAT TGCGCTGATC GGCACCGATC CCGTCAAGCA CAAGGCCAAT
GCCTGGAAGG TGGTGCGCAC GCTGAAGGGG CTGGGCGGCG GATCGCTGTT CCTCAAGACG
CATCCGAAGT CGAAGAACCT GTGGGTCGAC AGCACGCTCA ACCCGGAGGC GGGCATCAGC
CAGTCGGTGG CCATCTTCGA CATCGCCAAT CTCGACAAGG CGCCGGAAGT GGTGAACATC
GCCGAACTGG CAGGTCTGGG CGAGGGGCCG AAGCGCGTCG TGCAGCCGGA GTACAACAAG
GCCGGCGACG AAGTCTGGTT TTCGGTGTGG AACGGCCAGA CCCAGGAATC GGCCATCGTG
GTCATGAACG ACAAGACGCG CAAGCTCAAG GCCGTGATCA AGGACAAGCG CCTGATCACC
CCGACCGGCA AGTTCAACGT CTACAACACG CAGCACGACA TCTACTAG
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| Protein sequence | MDTRLSILAA SIFLMGATQA IAADAPPSGH PGTPDPELRY KGAPVPIKPE EAQETITPKA
PPVTAAEFAR AKQIYFERCA GCHGVLRKGA TGKPLTPDVT LPRGTEYLKV FIGFGSPGGM
PNWGSSGILS DAEIDIMARF LQHEPPMPPE YGLAEMKATW KLKVPPEKRP KKKMNKLDLE
NLFSVTLRDD GKIALIDGDS KKIVSTIETG YAVHISRMSA SGRYLFVIGR DAKIDLIDLW
MKEPAVVAEI KVGMEARSVE TSKYKGYEDK YAVAGTYWPP QFVIMDGDTL EPKKIVATRG
MTVDTQEYHP EPRVAAIIAS HEHPEFIVNV KETGKVLMAN YEDINNLKVT EIEAARFLHD
GGWDSTHRYF MSAANASNKI AVVDSKKQKL TALVEVGKIP HPGRGANFVD PKFGPVWATG
HLGDDSIALI GTDPVKHKAN AWKVVRTLKG LGGGSLFLKT HPKSKNLWVD STLNPEAGIS
QSVAIFDIAN LDKAPEVVNI AELAGLGEGP KRVVQPEYNK AGDEVWFSVW NGQTQESAIV
VMNDKTRKLK AVIKDKRLIT PTGKFNVYNT QHDIY
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