Gene Taci_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTaci_0315 
Symbol 
ID8630125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermanaerovibrio acidaminovorans DSM 6589 
KingdomBacteria 
Replicon accessionNC_013522 
Strand
Start bp336729 
End bp337940 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content63% 
IMG OID 
Productputative transcriptional regulator, GntR family 
Protein accessionYP_003316834 
Protein GI269791930 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.665801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCCAGTT TCTTCCAGGG TCTCTACGGT GAGAGGGTCA AGGACCTGCG TCCATCCCCC 
ATAAGGGAAA TGCTGCACCT GGTGAGGCGT CCGGGGATAA TCTCCTTCGC GGGGGGCATG
CCGGACCCGG AGGCCTTCCC GGTGGAACTC TTCTACCAGG CGGCGGGGAT AATAAAGTCC
CAGGGCAAGG ACGTGCTCCA GTACGGGACC ACCGAGGGCT ACGCCCCCCT GAAGGACTTC
CTGATCCAGT GGACCGCCCC CAGGATGGGC CGCAAGCTGG AGCACGACGA GATGCTCATA
ACCGCCGGCT CGTCCCAGGT GTCGGACCTG CTCTGCTGGG CCCTGATCGA CAAGGACGAC
CTTATCCTCA TGGAGGAGCC CTCCTTCCTG GGGGTCTTCC TCAACATGCA CAACCACGGG
GCCAAGTTCC TCACCGTCCC CTGCGACGAC GAGGGCATGA TGGTGGACCT GATCCCCGAG
AAGGTGGAGC GGGCCCAGCG GGAGGGCAAG AAGGTGAAGC TCTGCTACAC CATCGCCAAC
TTCCACAACC CCCTGGGGAC CACCCTGTCG CTGGAGAGGC GCCGTAAGCT CATCGAGTAC
GCCCACCGCT ACGGCTTCGC CATAATGGAG GACGATCCCT ACGGCTACGT GCGATTCGAG
GGGGAGCACC TGCCCACCCT GTTCTCCCTG GATGACCGGG GTGTGGTTAT CTACGCGGGC
TCCTTCTCCA AGATCCTGGC CCCCGGAACC CGGGTTGGAT GGTGCTGCGG CCACAAGGAT
ATAATCCGCA AGATGGCCAT CTTCAAGCAG GGGGTGGACG TGTGCACCAG CCTTGTGGCC
CAGGCCATGG TCTACGAGTA CTGCCGGCTG GGGCACCTGG ACTCCTTCCT CCCCAAGATA
ATCGACCACT ACCGCAAGAA GCGGGACGCC ATGGAGGACG CCATGAGACG GCACCTCCCC
CTGGAGAAGC TCCACTGGGT CAAGCCCCAG GGGGGCTACT TCTACTGGGT CAAGATGGAC
GGGATAGACT GCGACCGCCT CTTCCAGGTG GCGGTGGACA AACAGGTGGC CTTCGTCCCC
GGCAAGGCCT TCTACCCCAA CCGGGACGGG GGGGATCAGG AGATCCGGCT CTGCTACACC
TTCGCCTCCC CGGAGCAGAC CGACCAGGGC ATGAGGCGCC TGGGGGAGGC CATGAGGGAG
ATGATCCGGT AG
 
Protein sequence
MSSFFQGLYG ERVKDLRPSP IREMLHLVRR PGIISFAGGM PDPEAFPVEL FYQAAGIIKS 
QGKDVLQYGT TEGYAPLKDF LIQWTAPRMG RKLEHDEMLI TAGSSQVSDL LCWALIDKDD
LILMEEPSFL GVFLNMHNHG AKFLTVPCDD EGMMVDLIPE KVERAQREGK KVKLCYTIAN
FHNPLGTTLS LERRRKLIEY AHRYGFAIME DDPYGYVRFE GEHLPTLFSL DDRGVVIYAG
SFSKILAPGT RVGWCCGHKD IIRKMAIFKQ GVDVCTSLVA QAMVYEYCRL GHLDSFLPKI
IDHYRKKRDA MEDAMRRHLP LEKLHWVKPQ GGYFYWVKMD GIDCDRLFQV AVDKQVAFVP
GKAFYPNRDG GDQEIRLCYT FASPEQTDQG MRRLGEAMRE MIR