Gene TRQ2_1134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1134 
Symbol 
ID6092567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp1175975 
End bp1176577 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content44% 
IMG OID642488328 
ProductHAD family hydrolase 
Protein accessionYP_001739162 
Protein GI170288924 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAATTT TCCTTTTCGA TTACGACGGC ACACTGGCCG AAGACAACGG GTTCGCAGAG 
AAATATTTTA GAAAACTCGT TTCTTTTTTC AGAGATAGAG GTGTTTCGAT CTCTCCAGAG
CTGGTTCTTG GCTGTGTGGA GGAAATAACC AGGAATCCGG ATGGATCAAC CAATCTGGAG
AGATACATGA AATGCCTTGG AAAGAGAACG TCACAGTGTG CAGAGAAATG GAAAGAACTC
TTCATGGAGT TTTATGAAAG CGAACTTTTC GATTCGCTCA AAGATACGGT TAAACCTGTG
AGGAAGATAG TGGATCTTCT GAAAGAGAAG GAAAAAGAAG GGAAGGTTGT TCTGGCAACG
AACCCTGTCT TTCCAAGAAT CGCTATTTTG AAGCGACTGA ACTGGATTGG GTTGTCAGAA
GACGATTTTC ACTTGATAAC GGACATGGAG AGCTTCCATT TTTGCAAGCC AGATCCGAGG
TACTACCTCG AGATATGTGA AAAGATGAGA GTTTCTCCGG AAGACTGTGT TATGTACGGG
GACGACGAAT TGAACGATGG AGTGTGTGAA AAGTTGGGGA TGAAGTTCAT CAGAGTCCGC
TGA
 
Protein sequence
MRIFLFDYDG TLAEDNGFAE KYFRKLVSFF RDRGVSISPE LVLGCVEEIT RNPDGSTNLE 
RYMKCLGKRT SQCAEKWKEL FMEFYESELF DSLKDTVKPV RKIVDLLKEK EKEGKVVLAT
NPVFPRIAIL KRLNWIGLSE DDFHLITDME SFHFCKPDPR YYLEICEKMR VSPEDCVMYG
DDELNDGVCE KLGMKFIRVR