Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0690 |
Symbol | |
ID | 6092107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 710378 |
End bp | 712279 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642487876 |
Product | DNA topoisomerase I |
Protein accession | YP_001738726 |
Protein GI | 170288488 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000142344 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAGA AAGTGAAGAA ATATATCGTT GTTGAATCTC CTGCCAAGGC GAAGACGATC AAGAGTATTC TTGGGAATGA GTACGAAGTA TTCGCTTCGA TGGGGCACAT CATAGACCTT CCCAAGAGCA AGTTCGGTGT GGATCTGGAA AAGGATTTCG AACCGGAATT CGCGGTGATA AAAGGGAAAG AGAAGGTAGT TGAAAAGCTG AAGGATCTTG CAAAAAAAGG CGAACTGCTC ATCGCTTCTG ATATGGATAG AGAAGGGGAA GCCATAGCCT GGCACATAGC CAGGGTAACG AACACACTGG GGAGAAAGAA CAGGATCGTG TTCTCTGAGA TCACTCCTCG TGTGATAAGA GAAGCCGTTA AGAATCCTCG AGAGATTGAC ATGAAGAAAG TTCGTGCGCA GCTTGCAAGA AGGATTTTAG ACAGGATCGT TGGTTATTCT CTGAGTCCGG TTCTCTGGAG AAACTTCAAA TCCAATTTGA GCGCTGGTAG AGTCCAATCA GCAACCTTGA AGCTCGTTTG TGACAGAGAG AGAGAAATCC TCAGGTTTGT GCCAAAGAAG TACCACAGGA TCACCGTCAA TTTCGATGGT CTCACAGCAG AAATAGATGT GAAAGAAAAG AAGTTCTTCG ACGCTGAAAC GTTGAAAGAA ATCCAGAGCA TAGACGAACT CGTTGTAGAA GAGAAAAAGG TTTCTGTGAA AAAGTTTGCG CCTCCAGAAC CCTTCAAAAC CAGTACCCTC CAGCAGGAAG CGTATTCTAA ACTGGGTTTC TCCGTTTCCA AAACCATGAT GATTGCCCAG CAGTTGTATG AAGGCGTGGA AACAAAAGAT GGGCATATCG CGTTCATAAC CTATATGAGA ACAGATTCAA CGCGTGTTTC GGACTACGCG AAAGAAGAAG CCAGAAATCT GATAACGGAG GTCTTTGGAG AAGAGTACGT TGGTTCAAAG AGAGAAAGGA GAAAGAGCAA CGCAAAAATA CAGGATGCGC ATGAGGCGAT TCGTCCCACG AACGTTTTCA TGACACCTGA AGAAGCGGGA AAATACCTGA ATTCTGACCA GAAAAAACTC TACGAGTTGA TATGGAAGAG ATTTCTCGCA TCGCAAATGA AGCCTTCTCA ATACGAGGAA ACTCGTTTTG TCCTGAGAAC AAAGGATGGG AAGTACAGAT TCAAGGGAAC GGTGCTGAAG AAGATTTTCG ATGGGTACGA AAAGGTGTGG AAGACGGAAA GAAACACGGG AGAGTTTCCT TTCGAAGAGG GAGAATCTGT GAAACCGGTG GTTGTAAAAA TAGAGGAACA GGAAACCAAA CCGAAACCAA GGTACACAGA GGGTTCTCTT GTAAAAGAAA TGGAAAGACT CGGTATAGGT CGTCCCAGCA CATATGCGTC CACGATAAAG CTTTTGCTGA ACAGGGGTTA CATAAAAAAG ATCAGGGGCT ATCTCTATCC AACGATCGTT GGAAGCGTTG TCATGGATTA TCTGGAGAAA AAGTACTCTG ATGTTGTTAG CGTTTCCTTC ACAGCTGAAA TGGAAAAGGA CCTCGATGAA GTCGAACAGG GTAAGAAAAC AGACAAAATC GTTCTGCGGG AGTTTTATGA ATCCTTTTCC AGTGTGTTCG ACAGGAACGA CAGAATTGTG GTTGATTTTC CGACGAACCA GAAATGTTCG TGTGGAAAGG AAATGAGGCT CTCTTTTGGA AAATACGGCT TCTATTTGAA ATGCGAGTGT GGTAAAACCA GAAGCGTGAA AAACGATGAA ATTGCGGTCA TAGACGATGG AAAAATATTC CTGGGGAGGA AAGACAGTGA GAGTGGCTCT CCTGATGGGA GGAGTGTCGA GGGAAAGGGA AATCTCTCTG AGAAGCGGAG AAAGGGTAAA AAAGGCTCTT GA
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Protein sequence | MSKKVKKYIV VESPAKAKTI KSILGNEYEV FASMGHIIDL PKSKFGVDLE KDFEPEFAVI KGKEKVVEKL KDLAKKGELL IASDMDREGE AIAWHIARVT NTLGRKNRIV FSEITPRVIR EAVKNPREID MKKVRAQLAR RILDRIVGYS LSPVLWRNFK SNLSAGRVQS ATLKLVCDRE REILRFVPKK YHRITVNFDG LTAEIDVKEK KFFDAETLKE IQSIDELVVE EKKVSVKKFA PPEPFKTSTL QQEAYSKLGF SVSKTMMIAQ QLYEGVETKD GHIAFITYMR TDSTRVSDYA KEEARNLITE VFGEEYVGSK RERRKSNAKI QDAHEAIRPT NVFMTPEEAG KYLNSDQKKL YELIWKRFLA SQMKPSQYEE TRFVLRTKDG KYRFKGTVLK KIFDGYEKVW KTERNTGEFP FEEGESVKPV VVKIEEQETK PKPRYTEGSL VKEMERLGIG RPSTYASTIK LLLNRGYIKK IRGYLYPTIV GSVVMDYLEK KYSDVVSVSF TAEMEKDLDE VEQGKKTDKI VLREFYESFS SVFDRNDRIV VDFPTNQKCS CGKEMRLSFG KYGFYLKCEC GKTRSVKNDE IAVIDDGKIF LGRKDSESGS PDGRSVEGKG NLSEKRRKGK KGS
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