| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3858 |
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| Symbol | |
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| ID | 4074921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008042 |
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| Strand | - |
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| Start bp | 109942 |
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| End bp | 111195 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638004515 |
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| Product | glycosyl transferase, group 1 |
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| Protein accession | YP_611250 |
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| Protein GI | 99077991 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCC TTTTTGTGCA TCAAAACATG CCTGGCCAGT ATCGCGAGCT GGTGCGCTGG
CTTGCGGCAC AGGGAGGGCA TGAGCTGGTG TTTCTGAGCC AGCGTGGGGG TGTAAAAATC
CCGGGTGTAC ATACGCTGGT CTATACGCCC TTTCATGTAC CCGCAAAGGA CGCTTTTGGT
CTGTCCAAGG ACTGGGAAGC CGCGGCAGGG GCGGGTTTTG GCGCCGTGCA AACGATGCAA
AAGTTTGAGC GCAAGCACGG GTTTCGCCCT GATATCATTC TTGGTCATAC CGGCTGGGGA
GAGCTCAGTT TTTTTAAGGA TCTGTGGCCG GATGTGCCGA TCCTGGGGTT CTTTGAATAT
TACTACAGCA TGCAAGGTGG CATGGTGGGC TTTGATCCCG AACAGCCTCC CGGACCCCAT
GCGCCCTACT TCAATCGCGC CCGCAATGTG GTGCCATGCC TCAATCGCGA TGTGGTGGAT
CTGGGGCATG TGCCGACGCT CTGGCAGCGC GATCGCTTTC CGGCGTCCTT TCACGACAAG
ATGTATGTCT GCCACGATGG CATCCGCGCG GATCGACTGC ATGCCAATCC CGAGGCGCAG
CTCTCGCTGG GCCGGTTGGA GCAGCCCATT TCGCGCGGCG ATGAGATCGT GACCTATGTG
GCACGCAATA TGGAGCGGGC GCGTGGCTTT CATATCATGA TGCGGGCCCT GCCGGCCATT
CAGGCCGCGC GGCCCAATGC GCGTATCCTG ATGATTGGTG GCAATGAGGC CTCTTACGGG
CGTGAAAGCG AACACCCCGG GGGGCTGCGC GGCGAGATGG AAGCGGAGGT CGGCCAGTAT
GTTGACTGGA GCCGGGTGCA TTTCCTGGGC CGGGTGCCCT ACGGGGATCT GTGCCAGATC
ATTCAGCTGT CACGCTGCCA CATCTACCTC ACCATGCCCT TTGTTCTGAG CTGGTCGCTC
TTGGAGGCAA TGGCGATGGA GGCGACGATC GTGGCCGCCG ATGTGGAGCC GGTGCGCGAG
GTGATCACCC ATGGCGACAC CGGGCTTTTG GTGGATTTCT TTGACCCCGA GGCGCTGGCG
GCCCAAGTGG CCGAGGTGCT GGCGCGCCCG CAGGATTTTG CCAGCCTTGG CGCGCGCGCC
CGGGCGCGGG TGATGCAGGA CTATGATTTC CTGACCCGCT GCCTGCCTGA GCACCTCAGC
CAGATCAACC GGCTGGTGCC CTCCGCGCGG CCGATCCCGC TCCCCGAAGG GTAG
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| Protein sequence | MKILFVHQNM PGQYRELVRW LAAQGGHELV FLSQRGGVKI PGVHTLVYTP FHVPAKDAFG
LSKDWEAAAG AGFGAVQTMQ KFERKHGFRP DIILGHTGWG ELSFFKDLWP DVPILGFFEY
YYSMQGGMVG FDPEQPPGPH APYFNRARNV VPCLNRDVVD LGHVPTLWQR DRFPASFHDK
MYVCHDGIRA DRLHANPEAQ LSLGRLEQPI SRGDEIVTYV ARNMERARGF HIMMRALPAI
QAARPNARIL MIGGNEASYG RESEHPGGLR GEMEAEVGQY VDWSRVHFLG RVPYGDLCQI
IQLSRCHIYL TMPFVLSWSL LEAMAMEATI VAADVEPVRE VITHGDTGLL VDFFDPEALA
AQVAEVLARP QDFASLGARA RARVMQDYDF LTRCLPEHLS QINRLVPSAR PIPLPEG
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