Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3589 |
Symbol | |
ID | 4075516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 637924 |
End bp | 638838 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638005108 |
Product | sporulation related |
Protein accession | YP_611818 |
Protein GI | 99078560 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.428008 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAGGC AGGACACGCG CATGAAAGAC AAGGTTTCTG GCCCGGCGAG ACTTCAGAGA TTGGTTCCCA GTGGCGCGAT CCTTGCGCTA ACTGGCGCAT TGGTTCTTGC GGGCTGCGAA GAGGGCGCCA ATCTGCCGTT CCTTCAGCCC AAGGACAATG CTGAACAAGG CCTGCCCAGC AATTCCACTA AGCTTGTAGA GCGCGATGTC GAAGCCCCGG ATGTCTTTCA GGTGACCGAA GCTGGCCTGT GGGACGGTCG CCCCTCAATC GGTGGGGTCT GGGTGGCGCA TCCAGACGTG AAAGATCCCG AGCGGGTGAT CATTCGCAAC AATGCCAACG GCAAATTCGT CATTGGGGCC CTGTTCCGGC GCGAGCGGGC GATTCCGGGA CCGCGCCTGC AGGTATCTTC GGATGCGGCG GCAGCCCTGT CCATGCTGGC GGGCGCGCCT GTGGAACTGA ATGTCACGGC CCTGCGCCGC GAGGCCGTCG AGGACATCCC GCCTGAGGCT GAGATCCCTG AAATTGAGGG GCTTGAAGAG CAGCCACAGG TTGCAGAAAC GGCGGCGGTG GAGACACAAG CGCTGGATCC AATTGCCGGT GGTGCAGCCG CTGCCATCGA GGCCGCGGCA CCCGCACCCG AGCCTGCCCC TGCGGCGCCA ACGCCATCTG CTCGATCTGC CTTGGCAAAG CCATACATTC AGATTGGTAT TTTTAGCGTC GAGGCCAACG CCAAACGCAC CGCCGACCAG ATGCGCAATG CGGGGATCAT CCCAACAGTC TATGAGCAGT CTTCCAACGG CAAGGCGTTC TGGCGCGTGG TGGTCGGGCC CGCTCAGTCC AAAGGAGAGC GGACTCAGCT CCTGAAGGCG GTCAAGGCCG CTGGTTTTGC CGACGCCTAT GCCGTGACAA ACTGA
|
Protein sequence | MSRQDTRMKD KVSGPARLQR LVPSGAILAL TGALVLAGCE EGANLPFLQP KDNAEQGLPS NSTKLVERDV EAPDVFQVTE AGLWDGRPSI GGVWVAHPDV KDPERVIIRN NANGKFVIGA LFRRERAIPG PRLQVSSDAA AALSMLAGAP VELNVTALRR EAVEDIPPEA EIPEIEGLEE QPQVAETAAV ETQALDPIAG GAAAAIEAAA PAPEPAPAAP TPSARSALAK PYIQIGIFSV EANAKRTADQ MRNAGIIPTV YEQSSNGKAF WRVVVGPAQS KGERTQLLKA VKAAGFADAY AVTN
|
| |