| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3409 |
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| Symbol | |
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| ID | 4075583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 430821 |
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| End bp | 431840 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638004918 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_611643 |
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| Protein GI | 99078385 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.804556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.710727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATGGA TTTCGACGGT CTTCGTACAC AAAGCACTGG ACGCTGCAGT CTCTCTTGCA
AGCGCCGATG AAGATGCACG CGGGAAACTT TTCAAGAGCG TTGGTCTTGA TCCTTCGGCT
CCGGTTGATC CCGGCGCAAT GATCTCAGAT GGCGACTTCT TTGGGTTATT GGAACGCATC
GCAAAACTTG ATGATCGCGG TCGGTTCGTT CCGGTTCAGA TGGGCGCCTC TATGTGTTGC
GACGATTACG GCGCTTTTGG CCTCGCGTTC AAATCCGCAC CCGATCTGCT CAGCTCCTAC
GCGCGGGTAG AACGCTTTGG AAAGGTTGTC ACCTCGATAG CTAATTTCCG TGTTAAACAG
GTGGGACCCT CCGTTTTTAT GGAAGTTGTT CAAGGAGGGG ACCCGCGTCT TGGTCTTAGG
ATGACCAATG AACTGGCTTT GGCCGCTACG ATGTCGCTCA GTCAGGAGGT CAGCAGCGAG
GATTTTTCTC CCGTCGCCGT TCACCTCATG ACGGAGCGCC CCGAAGTCGA CGACGTGTAT
CACGCGCATT TTCGTTGCCC TGTTCACTTT GGCGCAGACC ACGATGCGCT TGAGGTGGCT
ACCACGGCAG CTGTCCGGTC CAATCGTCTT TCCGACAATG GGATGTCCAG GTTTTTTGAG
ACACATCTCG ACAACCAGCT TAGCCAAATC AGTGACAGGT CCGAACTGGA GCAGGGCATT
CTGGATCAAA TCGGCGAAGC GTTGAGCGAA GGTGTGCCCA CGCTCGCCGA GATCGCCGGG
TGTATGGGGA TGAGCAGCAG AACCTTGCAA CGCCGCCTGT CCGCAGAAGG TCTGGCTTAC
CAAGACCTGG TTTCAAGCGC GCGGAAATCA CTCTCCGAAC AGCTTTTGAG ACGCACGGAC
TACGCTTTGG CAGAGATCGC CTTCCTGACT GGTTTCTCCG ACCAGAGCAC GTTCACACGC
GCCTTTAAGC GTTGGCACCA GCAGACACCC GCCAACTACC GACGCGGCAC GCCTGTTTAG
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| Protein sequence | MGWISTVFVH KALDAAVSLA SADEDARGKL FKSVGLDPSA PVDPGAMISD GDFFGLLERI
AKLDDRGRFV PVQMGASMCC DDYGAFGLAF KSAPDLLSSY ARVERFGKVV TSIANFRVKQ
VGPSVFMEVV QGGDPRLGLR MTNELALAAT MSLSQEVSSE DFSPVAVHLM TERPEVDDVY
HAHFRCPVHF GADHDALEVA TTAAVRSNRL SDNGMSRFFE THLDNQLSQI SDRSELEQGI
LDQIGEALSE GVPTLAEIAG CMGMSSRTLQ RRLSAEGLAY QDLVSSARKS LSEQLLRRTD
YALAEIAFLT GFSDQSTFTR AFKRWHQQTP ANYRRGTPV
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