| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3388 |
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| Symbol | |
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| ID | 4075562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 407476 |
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| End bp | 408393 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638004897 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_611622 |
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| Protein GI | 99078364 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.604965 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAGAT TTTCGAACCC CAACAGTATT TTGGCTTTTG TGATCGTGGC CCGTGAGGGG
TCTGTGTCGC GGGCTGCGGA CGTCTTGAAC CTGACCCAAC CCGCGGTGAG CCATCAGATC
CGGCGATTAA GTGAGGATAT TGGTGTAACC CTGTTCACCC GCACGCCGCG TGGTCTGGAC
CTTACGCCAG ATGCGCAGCA TCTTCTGCCC AAGGCCGAAG AGGTGTTGCG CGTAATGGCA
GAGTTTCGCC GTGCGGCAAG CCAGCATAGC GATCATATCT CTGGGACGCT GCGGCTTGGA
ACCATTATCG ACCCGGAGTT CATTCGGTTA GGGCGGCTTC TGAGCCAGTT GGGAGCTTCA
AATCCGAGAA TCACAACCGA ACTTGTGCAC GGGGTGAGTG GGGAGATTCT GGAGAGGATT
CTGCGCAGGC AGGTGGATGC AGGCTATTAC CTTGCGGCGC CGGATCAGCT GGAGGCACTA
CCCTCCGAGA CCGAGCTCCA CGCGCAGAAG CTTGCGGATT TTGCCTATCG GATTATCGCG
CCGCCCGGTT GGGACGCACG GGTCGCCGGC GCGGGCTGGG CCGAGCTGGC CCGGCTGCCT
TGGATCGGCA CGCCCGAGGT ATCGGTTCAC AACCGCCTGT TGAGCCGCAT ATTTGCGGAA
CACGATTGCC AGCAAAACAC CGTCGCCCAG GTCGACCATG AGGCTTCGAT GCTGGAGATG
GTGCGCTCAG GCGTCGGGCT GAGCCTGTGC CGCGAGTCAA TCGCTCTGCA CCAAAGGCAA
TCTAACGGGG TCGTGATCTG CGAGACGCTC AGCGTTCCAG CCTCGCTCGG TGTCCTGACG
CTGAAAGACC GACTGGAAGA CCCGCTGATT GCAGCATTCT TTGATCAGTT GAGCGCGGTC
TGGTCGCCCA TCAGCTGA
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| Protein sequence | MERFSNPNSI LAFVIVAREG SVSRAADVLN LTQPAVSHQI RRLSEDIGVT LFTRTPRGLD
LTPDAQHLLP KAEEVLRVMA EFRRAASQHS DHISGTLRLG TIIDPEFIRL GRLLSQLGAS
NPRITTELVH GVSGEILERI LRRQVDAGYY LAAPDQLEAL PSETELHAQK LADFAYRIIA
PPGWDARVAG AGWAELARLP WIGTPEVSVH NRLLSRIFAE HDCQQNTVAQ VDHEASMLEM
VRSGVGLSLC RESIALHQRQ SNGVVICETL SVPASLGVLT LKDRLEDPLI AAFFDQLSAV
WSPIS
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