| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3215 |
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| Symbol | |
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| ID | 4075319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 210432 |
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| End bp | 211307 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 638004724 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_611451 |
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| Protein GI | 99078193 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAAA CAAGAAGCTG GATACATGCA TGGCTCCTGC TGTTTCCGGG GCTTGTGTTT
CTCATTGCCT TTACCCATCT GCCTGCGCTC ACTACCTTGT GGAGCAGTTT TTTCACGACG
CCTCGCGGGC GGCGCCCGGC CAAATGGGCA GGGCTTGAAA ACTACGAGAC GCTGATCGCC
GATCCAGTTT TCTGGAAAGT CCTTTGGAAT AACGCGATTT ATGCTGCTGG AACGATCCCG
CTGTCGGTGG TGATAGCGCT TCTAATGGCG CTTTGGGTCA ATCGGCAGAT GGTCGGACGG
GGCTTTGTGC GGATGGCCTA TTTTACTCCG ACCGTGCTGC CCATGATTGC CGTCGCAAAT
ATCTGGATGT TCTTCTACAC CCCCGGTTTT GGCCTCATTG ACCAGATCGG TGGCGCCTTT
GGCTTTGCGC AGACCAATAT TCTCGGCTCG GCAAATTCAG CGCTTTGGGG AGTGATGGTT
GTCACCATCT GGAAAGAAGC CGGGTTCTTC ATGATTTTCT ACCTTGCGGC ACTGCAAACC
ATCCCCACCA CATTGGTCGA GGCCGCTCGG GTCGAGGGCG CCGGAAGCTG GACGATTTTT
CGTCGCATCA CGTTGCCGCT TCTGATGCCG ACCACGCTGT TTGTGTCGAT CAACGCGGTG
GTGAACTCCT TTCGGATGGT GGACCATATT TTCATCCTCA CCGGGGGCGG GCCGGACAAT
GCCTCCTCGC TCTTGCTGTT TTACATCTAT GAGGTCGCCT TTCGGTTCTG GGACACGGCC
TATGCTGCGA CGCTCACGGT GGTGTTGCTG GTGTTCCTGA TCGTGCTTGC GATTGGGCAG
TTCTTTCTCT TTGATCGCAA GGTTCACTAC AGATGA
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| Protein sequence | MLQTRSWIHA WLLLFPGLVF LIAFTHLPAL TTLWSSFFTT PRGRRPAKWA GLENYETLIA
DPVFWKVLWN NAIYAAGTIP LSVVIALLMA LWVNRQMVGR GFVRMAYFTP TVLPMIAVAN
IWMFFYTPGF GLIDQIGGAF GFAQTNILGS ANSALWGVMV VTIWKEAGFF MIFYLAALQT
IPTTLVEAAR VEGAGSWTIF RRITLPLLMP TTLFVSINAV VNSFRMVDHI FILTGGGPDN
ASSLLLFYIY EVAFRFWDTA YAATLTVVLL VFLIVLAIGQ FFLFDRKVHY R
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