| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3118 |
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| Symbol | |
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| ID | 4074989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 91339 |
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| End bp | 91971 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638004620 |
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| Product | phage integrase |
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| Protein accession | YP_611354 |
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| Protein GI | 99078096 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACAC CAAACTTACC AGCCATTCGC GCACTTCGCC CAGCTTGGAA CAAGGGCCGC
ATTGTGGGTC AGAAACGGCC GCTGAAGCCA AAGCACGTCT GGGCGATCCG TGTCCGACTT
GAACTGGCCG AGAACCATCG AGACCTCGCG CTGTTCAATA TGGCCATCGA CAGCAAGCTG
CGCGGCTGTG ACTTGGTGAA GATGAAAGTC GTCGACGTCA TGGCGTCTGG TCTGATCAAA
GAACGGGCAT CGGTGCTACA AAGTAAGACA CAGAAGCCTG TGCGATTTGA GATATCCGAA
GGCACACGCG CCTCGATAGA AAAGTGGATG GAAGATGAGC TCATGGTCGG CTCGGAGTAC
CTTTGGCCGG GTCGGTTCCA TGAACGCCTG CACATCTCGA CACGCCAGTA TGCCCGGATC
GTCCGGGATT GGGTCACGTC GATCGGTCTG GAGGCCAGCG CATACGGAAC GCATTCGATG
CGGAGGACAA AAGTCACACA GATATACAAG AAGACCGGCA ACCTGAGGGC GGTCCAGCTG
CTACTTGGGC ACACCAAGAT GGACAGCACC GTCAGATATC TGGGTGTTGA ACTCGAAGAC
GCGCTAGCAA TCGCGGAGGC CATTGAAATT TAA
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| Protein sequence | MQTPNLPAIR ALRPAWNKGR IVGQKRPLKP KHVWAIRVRL ELAENHRDLA LFNMAIDSKL
RGCDLVKMKV VDVMASGLIK ERASVLQSKT QKPVRFEISE GTRASIEKWM EDELMVGSEY
LWPGRFHERL HISTRQYARI VRDWVTSIGL EASAYGTHSM RRTKVTQIYK KTGNLRAVQL
LLGHTKMDST VRYLGVELED ALAIAEAIEI
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