Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3076 |
Symbol | |
ID | 4075170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 44581 |
End bp | 45951 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638004577 |
Product | glutamate--cysteine ligase |
Protein accession | YP_611312 |
Protein GI | 99078054 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG3572] Gamma-glutamylcysteine synthetase |
TIGRFAM ID | [TIGR01436] glutamate--cysteine ligase, plant type |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.889782 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATTC CTCAGTCCGG TGGCGGACCA ATCGAAAGCC ATGCTCAACT GGCGGCCTAC ATGGAAGCGG GCTGCAAGCC GCGCGACGAT TGGCGCATTG GCACCGAGCA TGAGAAGTTC GGCTACTGCA AGGACACGCT GAAACCGCTC CCCTACGAGG GGACGCGCTC CATTCTGGCT GTTCTGGAAG GGTTGCGGGA CCGTCATGGC TGGGAGCCGG TGACCGAGGG CGGCAAGCTG ATCGGCCTCA CCAAGGACAT GGCCAATGTG AGCCTTGAGC CGGGGGGAGC GCTGGAGCTG TCAGGTGCCC CGCTCGAGAC CATCCATGAG ACCTGCGATG AGGTGAACAC CCACCTGCGC GAAGTCAAAG ACATTGCTGA CGAGATCGGT GTTGGATTCA TCGGTCTTGG GGCCGCCCCG ATCTGGCAGC ACGACGAAAT GCCGCTGATG CCAAAGGGCC GCTATCAGTT GATGAACGAC TACATGGAGC GCGTCGGCAC CATGGGGCGC GCGATGATGC GGCGCACGTG CACGGTGCAG GTGAACCTCG ATTTCGCCTC CGAGGCGGAT ATGGTGCAAA AGCTGCGCGT GGCGCTGGCG CTGCAACCGG TGGCGACGGC GCTCTTTGCC AATTCCCCCT TCTTTGAAGG CAAGCCTAAC GGGCTCAAAT CCTGGCGCAG CCACATCTGG CGGCATCTGG ATGATGCCCG TACCGGAATG CTGCCCTTTG TTTTTGAAGA GGGCATGGGC TTTGAACGCT ATGCGGACTA TGCCCTTGAT GTGCCGATGT ATTTTGTTTA CCGTGATGGC AAATATATCA ATGCTTTGGG CCAGTCTTTC CGGGATTTCC TCAAGGGCGA GCTACCCGCA TTGCCGGGCG AGACGCCCAC ATTGAGCGAC TGGGCCGATC ACCTGACGAC CGCATTCCCA GAAGCCCGCA TCAAGAAATA CATGGAAATG CGCGGCGCCG ATGGTGGCCC CTGGCGTCGC CTCTGTGCTT TGCCCGCGTT CTGGGTGGGT CTGATGTATA ATCAGTCTGC GCTGGACGCG GCCTGGGATC TGGTCAAGGG CTGGGACGCG GAGACTCGCG AAAACCTGCG CATCGAGGCT GCGGTCAAAG GGCTGCAGGC AGAGGTCGGC GCGATCAAGA TGCATGATCT GGCACGAGAG GTTCTGGCGA TTTCAGAAGC CGGACTGAAG GCGCGCGCCC GTCAGGGTGC AGGCGGTCTT GTCCCCAACG AGACTCATTT CCTCAATGCA CTGCGCGAGA GCGTCGAGAG CGGCAAAGTC CCCGCAGACG AACTCTTGGA TCGCTACAAT GGCGATTGGA ACGGTGATCT GACCCGGATC TATGCCGATT ACAGCTATTG A
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Protein sequence | MSIPQSGGGP IESHAQLAAY MEAGCKPRDD WRIGTEHEKF GYCKDTLKPL PYEGTRSILA VLEGLRDRHG WEPVTEGGKL IGLTKDMANV SLEPGGALEL SGAPLETIHE TCDEVNTHLR EVKDIADEIG VGFIGLGAAP IWQHDEMPLM PKGRYQLMND YMERVGTMGR AMMRRTCTVQ VNLDFASEAD MVQKLRVALA LQPVATALFA NSPFFEGKPN GLKSWRSHIW RHLDDARTGM LPFVFEEGMG FERYADYALD VPMYFVYRDG KYINALGQSF RDFLKGELPA LPGETPTLSD WADHLTTAFP EARIKKYMEM RGADGGPWRR LCALPAFWVG LMYNQSALDA AWDLVKGWDA ETRENLRIEA AVKGLQAEVG AIKMHDLARE VLAISEAGLK ARARQGAGGL VPNETHFLNA LRESVESGKV PADELLDRYN GDWNGDLTRI YADYSY
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