| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3066 |
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| Symbol | |
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| ID | 4075160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 33952 |
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| End bp | 37365 |
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| Gene Length | 3414 bp |
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| Protein Length | 1137 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638004567 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_611302 |
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| Protein GI | 99078044 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGA CACCGATCCA GAAGGCCAGC GGCATCCTGA GCTATTTCAC CCGGCACCGC
ACCGCCGCCA ACCTGTTGTT GATGGTGCTG CTGGTACTTG GCGCGGCAGC GATCCCCAAC
ATGCGGGCGC AGTTTTTCCC GGATGTGATT GTCGAGTCCG TCGATGTCTC CGTGGTCTGG
GAGGGCGCTG GGCCAGAGGA CGTGGACAGC GCCATCGTGC AGGTGTTGGA ACCCGCCTTG
CTGGCGGTTG ATGGGGTCGA GGACACCCGT TCGGCCTCTC GCGAGGGGCG CGCGGTCATC
GACATCGATT TTGAACCCGG CTGGGACATG GCGCGCGCCA CCGACGATGT GCAAAACGCG
GTGGATGCGA TCACCACCCT GCCCGAAGAG GCCGAAGAGC CGGAGGTCGA GCGCGCGGTC
TGGCGCGACC GGGTCACCGA CATTGTCATC ACTGGCCCCA TCGGGGCACA GCAGTTGGGG
ATCTTGGCGG ATGAACTGAT CCTGAGACTC TTCGAGGTGG GTGTGACCCG CACCACCATC
CGCGGGGTTG CAGCCCCCCG CACCATCATC GAAGTCCCCT CCAGCCAGCT CATTGCCCAT
GACATCACCC TCGCTGAAAT CGCTGCCGTG ATCGCCGCCG AGGTGGAGAT CAATCCCGCC
GGCGAAATCG AGGGCGCCAA CGCCCGCGTG CGCACCGGCA CTCAGAAACG CACCCCAGAG
GAACTGGAGG CGGTGGTTCT GCGCTCCGAG GCGGATGGCT CCGCCCTCAC CATCGGGGAT
ATGGCCTCGA TCCGCGTCGA AGGGGTGGAC CGCCAGCGCA GCTATTTTGT TGGCGACAAC
CGCGCTATGT CGATCCGTGT GGACCGCTCC GATCAGGGCG ACGCCATCCG CATCCAGCGT
CAGGTCGAAG AGGTGGTGGC CGAGATGAAC CTCTCCTTGC CGCAAGGGGT CGAGGTCTCC
TTGATCCGCA CCCGCGCCGA GGCCATCAGC GGGCGGCTCG ATATCCTTGT GGACAATGGT
TTGATGGGAC TTGGGCTGGT GGTGATCCTG CTCTTTTTGT TCCTCAACGC CCGTATTGCG
TTCTGGGTCG CCGCAGGCAT CCCGGCGGCC ATGTTTGCCG CCATCGCACT GATGTATATC
GGTGGGCTTA CCATCAACAT GATCTCGCTC TTTGGGCTGA TCATCACGCT TGGGATCGTG
GTGGATGATG CCATCGTGGT GGGCGAGCAT GCCGATTTCC GGGCCCGTCG CCTGGGGGAG
CCGCCCATGG TTGCAGCCGA GAATGCCGCC CGCCGCATGG CGATGCCGGT TTTTGCAGCC
ACGCTCACCA CCGTGATCGC CTTTTTTGGC CTGACGGCGA TCGGCGGGCG CTTTGGCGAA
TTGATCGCGG ATATTCCCTT TACGGTGATC GCCGTTCTGG CGGCGAGCCT TGTGGAATGT
TTCCTGATCC TGCCAAACCA CATGGCACAT GCCCTGGTCC ATCGCAGCAA GGAACACTGG
TATGACGCCC CCAACCGGGT GGTGAACCGG GGCTTTCGCT GGTGTCGCGA CCAGCTGTTT
CGCCCGCTAA TGGTGGGCGT CGTGCGTGCC CGCTACGTTG TGGTGGCAGG GGCCTTGGTG
CTGCTGGCCA GCCAGATGGC GCTCTTTATC AAGGGGGATG TCACCTGGCG CTTTTTCAAT
GCGCCAGAAC GGGCGTCCGT ATCAGGTAAT TTTGCCATGG TCGAAGGTGC CACCCGTGCC
GACACGCTGG CGCAGATGCG CGAGTTTCAG CGTATGGTCG ACGTCCTTGG CGCCGAGTAC
GAGGAGCGCT ATGGCCGCAA TCCGGTTGAC TTTGTCATGG CGGAAGTGGG CGGCAACACC
GGTCGCGGCC TTGCGGGCAC GGAAACCAAG GACAGCGACC TCCTGGGTAG CATCGCAATC
GAGTTGATCG ACGCTGACCT GCGCCCCTAT TCCAGTTTCG CCTTCGTGGG CGAGTTGCAA
AAACGCGTGG TGCAGATGCC GCTTACCGAG GTGGTCTCCT TCCGGGGCTG GCGCTCTGGT
CCCGGGGGCG ATGCGCTGGA CGTGCAGTTT TACGGCGCCG ATGTCACCAC GCTCAAGGGC
GCGGCGGAGG ATCTTAAAAC CGCCCTCACC CGCTACCCCG AGGTCTCCGC CGTCGAGGAC
AATCTCGCCT ATGACAAGGA AGAGCTGGTT CTGGATCTCA CCCCGCAGGG TCAGGCGCTC
AATTTCACCA TCGACAGCCT GGGGCGGGCG CTGCGCCAGC GGCTCAATGG GATTGAGGCC
GCGACCTATC CGGAGGGGCC GCGCTCAGCC CAGATCCGGG TAGAGCTGCC CGAAGGCGAG
CTCACCGCGG ATTTCCTCGA GCGCACGCAG ATGCGCGCGC CCTCGGGGAT TTATGTGCCG
CTCTCGGATA TTGTCACCGT CAGCCAGCGC ACCGGTTTTT CAACCGTGCG GCGCGAAAAC
GGCGTGCGGT TGATCTCCGT CACCGGCGAC ATTTCCGAGG ATGACCCGGT GCAGGCCGAA
GCCATCATGG AGGCGCTGGA GACCGAGATC CTGCCCAAGA TCGCCGAGGA ACGTCAGGTC
GAATTCCGCC TCTCTGGCCT CAGCGAACAG GAAGACGAGT TCCTCTCTGA TGCGCGCACC
GGGCTGATCC TCTGCCTGAC GGGCATCTAT CTGGTGCTAT GCTGGATCTT TTCGAGCTGG
ACGCGCCCCA TCGTGGTCAT GGCGATCATT CCCTTTGGTC TCGTGGGGAC CATCTGGGGG
CATTACCTCT GGGATTTGCC GATGAGCATG TTCACCGTGG TCGGCTTGTT GGGGATGACG
GGGATCATCA TCAACGACTC CATCGTGCTG GTCTCTACCA TTGATGAATA CGCACAGGAG
CGCGGTCTCA TCCCCTCCAT CATTGACGGG GCGGCAGATC GATTGCGGCC CGTGATGCTG
ACAACGCTCA CAACGGTTCT GGGGCTTGCG CCCTTGATGT ATGAAACCTC ACAGCAGGCA
CAGTTTCTGA AACCGACAGT CATCACCCTG GTCTATGGCC TTGGGTTCGG GATGTTCCTC
GTGCTTTTGG TGGTACCGGC TCTGGTCGCC ATTCAGGCGG ATGTCGCGCG CCCGTTCCAG
GCGCTGAAAC GTGCTGTCGC CGCCGGGCCG CATCGGGTTG CCCACCGCCT GCGCGCGTTG
ATCCTGCTCG GGGCCGCTCT GCAGGCAGTT TGGCTTGGGC TGACCTTGGG CTGGACCTTG
CTCACAGGGG CGCTGCCTGC CGCCGTTGGC ACCGCACTGC CCTTTGTGAC GCAGATGGAT
CCCCTGCGCG CAGCACTCAT GCTGGGCCTT GGGGGGGTGA GCGTTCTGGC GCTCCTTGTT
TATGTGATTG GGGCGGTGGG CGCACTGCGC GGGACATCAC GCCAGACCTC CTGA
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| Protein sequence | MATTPIQKAS GILSYFTRHR TAANLLLMVL LVLGAAAIPN MRAQFFPDVI VESVDVSVVW
EGAGPEDVDS AIVQVLEPAL LAVDGVEDTR SASREGRAVI DIDFEPGWDM ARATDDVQNA
VDAITTLPEE AEEPEVERAV WRDRVTDIVI TGPIGAQQLG ILADELILRL FEVGVTRTTI
RGVAAPRTII EVPSSQLIAH DITLAEIAAV IAAEVEINPA GEIEGANARV RTGTQKRTPE
ELEAVVLRSE ADGSALTIGD MASIRVEGVD RQRSYFVGDN RAMSIRVDRS DQGDAIRIQR
QVEEVVAEMN LSLPQGVEVS LIRTRAEAIS GRLDILVDNG LMGLGLVVIL LFLFLNARIA
FWVAAGIPAA MFAAIALMYI GGLTINMISL FGLIITLGIV VDDAIVVGEH ADFRARRLGE
PPMVAAENAA RRMAMPVFAA TLTTVIAFFG LTAIGGRFGE LIADIPFTVI AVLAASLVEC
FLILPNHMAH ALVHRSKEHW YDAPNRVVNR GFRWCRDQLF RPLMVGVVRA RYVVVAGALV
LLASQMALFI KGDVTWRFFN APERASVSGN FAMVEGATRA DTLAQMREFQ RMVDVLGAEY
EERYGRNPVD FVMAEVGGNT GRGLAGTETK DSDLLGSIAI ELIDADLRPY SSFAFVGELQ
KRVVQMPLTE VVSFRGWRSG PGGDALDVQF YGADVTTLKG AAEDLKTALT RYPEVSAVED
NLAYDKEELV LDLTPQGQAL NFTIDSLGRA LRQRLNGIEA ATYPEGPRSA QIRVELPEGE
LTADFLERTQ MRAPSGIYVP LSDIVTVSQR TGFSTVRREN GVRLISVTGD ISEDDPVQAE
AIMEALETEI LPKIAEERQV EFRLSGLSEQ EDEFLSDART GLILCLTGIY LVLCWIFSSW
TRPIVVMAII PFGLVGTIWG HYLWDLPMSM FTVVGLLGMT GIIINDSIVL VSTIDEYAQE
RGLIPSIIDG AADRLRPVML TTLTTVLGLA PLMYETSQQA QFLKPTVITL VYGLGFGMFL
VLLVVPALVA IQADVARPFQ ALKRAVAAGP HRVAHRLRAL ILLGAALQAV WLGLTLGWTL
LTGALPAAVG TALPFVTQMD PLRAALMLGL GGVSVLALLV YVIGAVGALR GTSRQTS
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