| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3036 |
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| Symbol | |
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| ID | 4075741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 3409 |
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| End bp | 4425 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638004537 |
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| Product | sulfonate ABC transporter, periplamic sulfonate-binding protein |
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| Protein accession | YP_611272 |
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| Protein GI | 99078014 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTCA ACAGACGACA GACATTGGCG CTAATGGGCG CCGCCGCTGC ATCAGGCCTC
GCCGCTCCGG CGCTTGCTTC TGGCAAAAAA CCGGTGGTGG GCGCGCTGAG CCTCACGAGC
CATTCTGGCA GCTTTATCGC GCTGGAGCGG GGATATTTCA AAGAGGCGGG CCTCGATGTC
GAGCTCAAGT TCTTTCAAGC CGCACAGCCC ATGGCCGTTG CCATCGCCTC CGGTGACGTA
GATTTCGGCG TTACCGCGAT TTCCGGCGGC CTCTTGAGCC TTGCAGACAA AGGCGCGGTC
AAGGTGATTG GCGGCGCGCT ATCCGAGGAA CCCGGCATCG ACGGGCAGAA GATCCTTGCC
TCTGATGCAG CCTATCAAGC GGGGCTCACG TCGGTCGCGG CTCTGGATGG CAAACGCTAC
GGGATGACCA CTGCGGGATC GTCCTTTCAC TACATGGGCT CCAAGATCGC TGGCGCTGAA
GGCGGGACGC CGCAGTTTGT GCCACTGCAA AAGGTTGGCG CGATTATTGG CGCGCTGAAA
TCGGGTCAGA TTGATGCCTG GTCCATCGTA CCCCATATCG CAAAGCCGCT CGCAGGCTCG
GGCGCGGTGC ATATCATCGG CAATGTCGCG GACTATCTGC CGAATTACCA GGTCACAACT
GTCTTTACCT CTGCGCAGAA CGCGAGCAAG GAACGCGGTC TGACAGAGAG CTTCCTCAAG
GGCTTTGGCA TGGGGGTGTC GGATTACAAC GCCACCATGG TCGACAAGCA AAACGGTGAG
GACGCCATCA ACGAGATGGT CGATCTGATC CACAAATATG TCTACACCGA CCGCCCGCGC
GAAAAAGCAG CGCCGTCGAT CATCAATGGG TCCATGCGTC TCAACAAAGA TGCTGCGATC
AATGTGGCCT CGGTGTCTGA TCAGCTGGCC TGGATGCAGT CGGAGGGCCT TGTCGATGCC
GGGATCACGC TCGAGACCTT CCTCGATACC AGCTACGTCG ATGTGATCGG CGCCTAA
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| Protein sequence | MTFNRRQTLA LMGAAAASGL AAPALASGKK PVVGALSLTS HSGSFIALER GYFKEAGLDV
ELKFFQAAQP MAVAIASGDV DFGVTAISGG LLSLADKGAV KVIGGALSEE PGIDGQKILA
SDAAYQAGLT SVAALDGKRY GMTTAGSSFH YMGSKIAGAE GGTPQFVPLQ KVGAIIGALK
SGQIDAWSIV PHIAKPLAGS GAVHIIGNVA DYLPNYQVTT VFTSAQNASK ERGLTESFLK
GFGMGVSDYN ATMVDKQNGE DAINEMVDLI HKYVYTDRPR EKAAPSIING SMRLNKDAAI
NVASVSDQLA WMQSEGLVDA GITLETFLDT SYVDVIGA
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