Gene TM1040_2942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2942 
SymbolflgI 
ID4077093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp3112588 
End bp3113691 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content59% 
IMG OID638008271 
Productflagellar basal body P-ring protein 
Protein accessionYP_614936 
Protein GI99082782 
COG category[N] Cell motility 
COG ID[COG1706] Flagellar basal-body P-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.984574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.211338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGT TTCTTCATAT CCTCATCACC TGCCTAGTGC TGCCTACGCT TGCACAGGCC 
AACGCAATCC GCCTCAAGGA CCTTGTCGAG TTTGACGGGG TCCGGGGGAA TGATCTGGTC
GGTTACGGCT TGGTCGTCGG TCTTGATGGC ACGGGGGACG GGCTTCGCAA CTCTCCCTTT
ACCGAAGAAA TCATGACCAA CATCCTTGAG CGCCTCGGCG TGAACGTAAG TGGCGAGCAA
TTCCGGCCAA AGAACGTCGC GGCAGTTTTT GTGACCGCGA CCCTGCCACC CTTTGCACGC
GTTGGGGGCA CGATTGATGC GACCGTTTCT GCAATTGGGG ACTCCAGCAG CCTTCTGGGC
GGGACATTGA TCATGACGCC TCTCAATGCG GCGGATGGCC AAATCTATGC CGTCGCGCAG
GGCACCATTC TGGCAGGCGG AGCGGTTGCC GAAGGCGATG CCGCGACCGT GACACAGGGG
GTGCCGACTT CTGGTGTGAT CCCATCAGGT GCTCGGGTCG AGCGTGAGAT CGAGTTTGAT
CTCTCGTCGC TCAATTCCAT GCGACTTGCG CTGCGTGAGC CCGATTTTAC CACTGCCGGC
CGCATCGAGC GAGCGATCAA CAATGAATTT GGTCGCAATG TCGCGGTGAT GCGCGATTCA
GGTACTGTCG AAGTCAACAT CCAACGCACC AATGCGCGCT CGACAGCGCA TGCCGTGGGG
CGGATGGAGA ACGTGCTGGT TGAACCGCAA CGAAAGGCGC GTGTGGTCGT AGACCAGCGC
TCCGGTACCA TTGTGATGGG TAGCGATGTG CGCATCTCCA ACGTGGCGGT CGCCCAGGGG
AATCTGACAC TGCGTGTCGA GGAAGCTCCG CTGGTCTCGC AACCTAATCC GTTTGCTGAT
GGCGAAACCG TTGTGGTTCC GCGGACTGGA GCCGCCATCG AAGAAGAAGA CGGTATCCAG
CTTGCAGAGG TTCCCGAAAC CACTTCGCTC TCTGAGGTTG TCTCTGGTCT CAATGCGCTG
GGCGTTTCAC CAAGGGACAT GATCGACATT CTAAAAAGTC TCAAGGCTGC AGGGGCGCTG
CATGCGGAGT TCGTCGTGCG TTGA
 
Protein sequence
MRKFLHILIT CLVLPTLAQA NAIRLKDLVE FDGVRGNDLV GYGLVVGLDG TGDGLRNSPF 
TEEIMTNILE RLGVNVSGEQ FRPKNVAAVF VTATLPPFAR VGGTIDATVS AIGDSSSLLG
GTLIMTPLNA ADGQIYAVAQ GTILAGGAVA EGDAATVTQG VPTSGVIPSG ARVEREIEFD
LSSLNSMRLA LREPDFTTAG RIERAINNEF GRNVAVMRDS GTVEVNIQRT NARSTAHAVG
RMENVLVEPQ RKARVVVDQR SGTIVMGSDV RISNVAVAQG NLTLRVEEAP LVSQPNPFAD
GETVVVPRTG AAIEEEDGIQ LAEVPETTSL SEVVSGLNAL GVSPRDMIDI LKSLKAAGAL
HAEFVVR