| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2839 |
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| Symbol | |
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| ID | 4076658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 3006766 |
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| End bp | 3007389 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638008168 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_614833 |
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| Protein GI | 99082679 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.819932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGAA ATATCGCAAT TCTGGCGTTT GCCAGTGTCG CGGCTCTTTT GGGCGGCGTT
TGGTATTTGA CCCTGCGGGG CGGCGCATCT GACGATGCAT TTGCGCAGTG CCGAGCCAGT
GCTGTTGCAG GCGGCAGCGC GGCGATCGGG GGGCCGTTTG AGCTGGTGAA CGCCAAAGGT
GAGACCGTGA CCGACAAGGA TGTGATCACC GAGCCTTCGA TTCTGTATTT TGGCTACACG
TTCTGCCCTG ATGTTTGCCC GCTGGACACC GCGCGTAACG CCGAGGCTGT GGATGTACTG
GCGGATCGGG GCTATTCGAC GACCCCGGTG TTCATTTCGA TCGATCCCAA GCGCGACACC
CCCGAAGTGG TCGGTGACTT TGCCTTTAAC CTGCATGAGA AGATGATCGG TCTCACCGGA
TCCCCCGAGC AGGTCAAGGC CGCAAGCCAG GCTTACAAGA CCTATTACAA GGCGCAGGAA
GGGGACGAGG ACTACTATCT CGTAGATCAC ACCACCATGT CCTACCTCGT GTTGCCCGAA
CACGGTTTTG TGGACTTTTT CCGCCGGGAC GTGTCGCCAG AGCAGATGGC GGACCGTGTC
GCCTGTTTTA TCGACAACAG CTGA
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| Protein sequence | MMRNIAILAF ASVAALLGGV WYLTLRGGAS DDAFAQCRAS AVAGGSAAIG GPFELVNAKG
ETVTDKDVIT EPSILYFGYT FCPDVCPLDT ARNAEAVDVL ADRGYSTTPV FISIDPKRDT
PEVVGDFAFN LHEKMIGLTG SPEQVKAASQ AYKTYYKAQE GDEDYYLVDH TTMSYLVLPE
HGFVDFFRRD VSPEQMADRV ACFIDNS
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