18 homologs were found in PanDaTox collection
for query gene TM1040_2811 on replicon NC_008044
Organism: Ruegeria sp. TM1040



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008044  TM1040_2811  hypothetical protein  100 
 
 
173 aa  348  2e-95  Ruegeria sp. TM1040  Bacteria  normal  0.248664  normal  0.24254 
 
 
-
 
NC_013947  Snas_4295  Chloramphenicol phosphotransferase family protein  37.84 
 
 
192 aa  99.8  2e-20  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_0587  Chloramphenicol phosphotransferase family protein  33.54 
 
 
186 aa  79.3  0.00000000000002  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0932492  hitchhiker  0.0000000361338 
 
 
-
 
NC_011884  Cyan7425_0311  Chloramphenicol phosphotransferase family protein  29.38 
 
 
209 aa  66.2  0.0000000002  Cyanothece sp. PCC 7425  Bacteria  normal  0.0612634  normal  0.91795 
 
 
-
 
NC_010001  Cphy_2503  chloramphenicol phosphotransferase family protein  24.26 
 
 
192 aa  62.8  0.000000002  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12654  hypothetical protein  26.67 
 
 
225 aa  60.8  0.000000009  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000266033  normal 
 
 
-
 
NC_010001  Cphy_3626  chloramphenicol 3-O-phosphotransferase-like protein  23.53 
 
 
167 aa  56.2  0.0000002  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00000361884  n/a   
 
 
-
 
NC_013131  Caci_6187  Chloramphenicol phosphotransferase family protein  27.37 
 
 
176 aa  51.6  0.000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_2215  chloramphenicol phosphotransferase family protein  25.42 
 
 
176 aa  50.8  0.000008  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1761  guanylate kinase  25.26 
 
 
207 aa  47.8  0.00009  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_0035  guanylate kinase  28.66 
 
 
209 aa  45.1  0.0005  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_2000  guanylate kinase  27.69 
 
 
223 aa  42.7  0.002  Methylobacterium extorquens PA1  Bacteria  normal  0.0607745  normal 
 
 
-
 
NC_011757  Mchl_2277  guanylate kinase  27.69 
 
 
223 aa  42.7  0.002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.140709  normal 
 
 
-
 
NC_011989  Avi_3296  chloramphenicaol phosphotransferase protein  23.04 
 
 
220 aa  43.5  0.002  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1889  Chloramphenicol phosphotransferase family protein  39.22 
 
 
173 aa  42.4  0.003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0704697 
 
 
-
 
NC_010725  Mpop_1953  guanylate kinase  27.46 
 
 
223 aa  41.2  0.007  Methylobacterium populi BJ001  Bacteria  normal  0.217119  normal  0.0786696 
 
 
-
 
NC_012850  Rleg_0648  Chloramphenicol phosphotransferase family protein  25 
 
 
213 aa  41.2  0.007  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.276439 
 
 
-
 
NC_010524  Lcho_0729  guanylate kinase  30.3 
 
 
209 aa  40.8  0.01  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.148488 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>