Gene Lcho_0729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0729 
Symbolgmk 
ID6163066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp777448 
End bp778077 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content65% 
IMG OID641663479 
Productguanylate kinase 
Protein accessionYP_001789767 
Protein GI171057418 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0194] Guanylate kinase 
TIGRFAM ID[TIGR03263] guanylate kinase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.148488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA TGGAATTTCC CGGCAATCTC TATGTCGTCG CAGCGCCTTC CGGGGCGGGC 
AAATCGAGCC TGGTCAAGGC CCTGCTGGAA CTGGATGCGC GCCTGATGGT GTCGGTCTCG 
CACACCACGC GCAAGCCGCG TGGCCAGGAG CAGGACGGCC GCGAATACTG GTTCATCCCG 
GAGCCGGCGT TCCGCGCCAT GATCGCGCAC GGCGACTTTT TCGAGTGGGC CGAGGTGCAC 
GGCAACCTGT ACGGCACCTC CCGCGCAGCG ATCGAGGCCC GCCTGAAGGC GGGCGAGGAT 
GTGGTGCTGG AGATCGACTT CCAGGGCGCT CTGCAGATCA AGCAGCTGTT CCCGATGGCG 
GTGCTGATCT TCATCCTGCC GCCGTCGTGG AGCGAGCTTC GTCAGCGTCT GCTGCGGCGC 
GGCGAGGATG CCGGCGAGGT GATCGAGCAG CGCATGGTCA ACGCCCGTCA CGAGGTGGCG 
CAGGCGCGGC ATTTCGACTA CATCGTCGTC AACGCGCTGT TCGAGACGGC GTTGTTCGAC 
CTCAAGACCA TCGTGCACGC ACAACGGTTA AAATACGCGG CTCAGCGCCG CAGCCGCCCG 
GCTGTGTTCG ACGCGCTGCA ACTGTCCTGA
 
Protein sequence
MKIMEFPGNL YVVAAPSGAG KSSLVKALLE LDARLMVSVS HTTRKPRGQE QDGREYWFIP 
EPAFRAMIAH GDFFEWAEVH GNLYGTSRAA IEARLKAGED VVLEIDFQGA LQIKQLFPMA 
VLIFILPPSW SELRQRLLRR GEDAGEVIEQ RMVNARHEVA QARHFDYIVV NALFETALFD 
LKTIVHAQRL KYAAQRRSRP AVFDALQLS