| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2667 |
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| Symbol | |
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| ID | 4077578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2802298 |
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| End bp | 2803320 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638007991 |
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| Product | peptidase S58, DmpA |
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| Protein accession | YP_614661 |
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| Protein GI | 99082507 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3191] L-aminopeptidase/D-esterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCCG GTCCCCGCAA TCTCATCACC GATGTCACCG GCCTGCGTGT TGGCAATGCC
GCGGACGCGC GGTTGAAATC AGGCACCACG GTCCTGACCG CGGATCAGCC GTTCACGGCA
GCGGTGCATG TGATGGGGGG CGCCCCCGGC ACGCGAGAGA CCGATTTGCT CGCGCCCGAC
AAAACCGTGC CCGCCGTTGA CGCGCTCGTG CTCTCTGGCG GCTCGGCCTA TGGGCTGGAT
GCCTGCTCGG GCGTGGTGGA CGGGCTGCGC GCCATGGGGC GCGGGTTTCG TCTTGGTCCC
GCCATTGTGC CCATCTGCCC CGGCGCGATC ATCTTTGATC TGTTGAACGG CGGCGACAAG
GACTGGCGGG ACAATCCCTA TCCCGCGCTT GGGCGCGCCG CGCTCAGGGA CGCCAGTGCG
GAGTTTGCCC TCGGCACGGT GGGCGCGGGC ACCGGCGCGC TCACGGGTAT GCAAAAGGGC
GGGCTGGGGT CGGCCTCGCT GGTGCTCGAA AATGGCCTCA CCGTGGGGGC GCTGGTGGTG
GTGAACCCGA TTGGATCGGT GACCACCCCG GGCGAGCGCC ACTTCTGGGC GGCCCCGTTT
GAAATCGACG GAGAATTCGG CGGGCTTGGG CCTGACCCCA GCGCCGGGAT CGGGCGCAGC
CTGCGCAGCC GCAAGATGGA GGCCATGGCA GAGCTGGCAG GCGCAGCCGT CTCCTCGGAG
GGGTCCAACA CCACGATTGC GATTGTGGCC ACGGATGCGG CGCTGACCAA AGCCGAAGCC
ACCCGCATGG CGACCACCGC CCATGACGGC ATGGCGCGGG CCATCCTGCC GAGCCATGGG
CCACATGATG GCGATCTGGT CTTTGCAGCC GCCACCGGCG CGCAGTCCAT GACCGACCCC
GCAGCGGATA TGTTGGCGCT GTGCCATGCC GGATCGCTCT GCCTCGCGCG TGCGATCGCC
CGCGCGGTCC ATGCCGCCAC CCCGGCCGAG GGTGATATTC TGCCCTGCTG GTCAGACTCC
TGA
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| Protein sequence | MKPGPRNLIT DVTGLRVGNA ADARLKSGTT VLTADQPFTA AVHVMGGAPG TRETDLLAPD
KTVPAVDALV LSGGSAYGLD ACSGVVDGLR AMGRGFRLGP AIVPICPGAI IFDLLNGGDK
DWRDNPYPAL GRAALRDASA EFALGTVGAG TGALTGMQKG GLGSASLVLE NGLTVGALVV
VNPIGSVTTP GERHFWAAPF EIDGEFGGLG PDPSAGIGRS LRSRKMEAMA ELAGAAVSSE
GSNTTIAIVA TDAALTKAEA TRMATTAHDG MARAILPSHG PHDGDLVFAA ATGAQSMTDP
AADMLALCHA GSLCLARAIA RAVHAATPAE GDILPCWSDS
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