| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2616 |
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| Symbol | rplS |
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| ID | 4077527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2749710 |
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| End bp | 2750081 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638007940 |
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| Product | 50S ribosomal protein L19 |
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| Protein accession | YP_614610 |
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| Protein GI | 99082456 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0335] Ribosomal protein L19 |
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| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.133816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATCTGA TCGCACAACT CGAAGCGGAG CAGATTGCTG CGCTGGGGAA AGAGATCCCC
GATTTCAAAG CCGGTGACAC CATCCGCGTC GGCTACAAAG TGACCGAAGG CACCCGCACC
CGTGTGCAGG CCTACGAAGG CGTCTGCATC AGCCGCAAGA ACGGCTCCGG CATCGCTGGT
TCCTTCACCG TCCGCAAGAT TTCCTTCGGC GAAGGCGTGG AACGTGTGTT CCCGCTCTAC
TCCACCAACA TCGAGTCCAT CGAGGTGGTT CGTCGTGGTC GCGTCCGTCG CGCCAAACTC
TACTACCTGC GTTCGCGTCG CGGCAAATCC GCCCGTATCG CCGAAGACGC AAACTACAAA
GCCAAAGCGT AA
|
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| Protein sequence | MDLIAQLEAE QIAALGKEIP DFKAGDTIRV GYKVTEGTRT RVQAYEGVCI SRKNGSGIAG
SFTVRKISFG EGVERVFPLY STNIESIEVV RRGRVRRAKL YYLRSRRGKS ARIAEDANYK
AKA
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