Gene TM1040_2613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2613 
Symbol 
ID4077524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2747330 
End bp2747662 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content60% 
IMG OID638007937 
Producthypothetical protein 
Protein accessionYP_614607 
Protein GI99082453 
COG category[S] Function unknown 
COG ID[COG3422] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.40017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.147293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAA AGTTTGAACT CTACACCGAC AACGCAGGCG AATTTCGCTT CCGCCTCAAG 
GCGGGCAATG GCGAGAACAT CCTGGCCAGC GAAGGCTACA AGCAAAAGGC CAGCGCCGAA
AACGGAATCG AGTCGGTCAA GAAGAACGCC GCTGACGAGG CCCGTTTCGA GCGCAAGGAA
ACCGCAGCTG GCAAGCATAT GTTCAACCTC AAGGCCAGCA ACGGTCAGGT GATCGGCACC
TCGCAGAGCT ACGCAAGCGC CTCCGGTCGT GATGGCGGCA TCGAGTCGGT GATGCGCAAC
GCCCCCGAGG CCCGCATCGA AGACCTGACC TGA
 
Protein sequence
MAAKFELYTD NAGEFRFRLK AGNGENILAS EGYKQKASAE NGIESVKKNA ADEARFERKE 
TAAGKHMFNL KASNGQVIGT SQSYASASGR DGGIESVMRN APEARIEDLT