Gene TM1040_2492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2492 
Symbol 
ID4076857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2632860 
End bp2633645 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content59% 
IMG OID638007816 
Productputative esterase/lipase/thioesterase 
Protein accessionYP_614486 
Protein GI99082332 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.377015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCG ACGACGCCTA TGCCAACGGA GCCTATATCG AAGGAGCCGC AGACTATCCT 
CCGCGCTGGG CGGCCTCCGC AGAAGATTTC CGCAACAGTC TGCAGGACCG GGCGCGCTTG
AACCTTTCTT ATGGCGAAGG TGACCGACAC AAGTTTGATT TGTTCCTGCC CGAAGGCACC
CCCGTGGGGC TGTTTGTCTT TGTGCATGGC GGGTACTGGA TGGCATTCGA TAAATCGAGC
TGGTCGCATC TGGCGGTTGG GGCGCTCTCA AAAGGATGGG CGGTGGCGAT GCCGTCATAC
GAACTTTGCC CCGAGGTGCG CATTTCCGAG ATCACGCAGC AGATTTCGCA GGCTGTAACG
GCAGCTGCAA AAGAGATCGA TGGTCCGATC GTTCTGGCGG GCCACTCCGC CGGGGGGCAT
CTGGTTGCGC GGATGCTTGA CCCCGAAGTG CTGCCGGAGG CCGTTGGGGC ACGTATTCGC
AACGTTGTGC CGATCTCTCC ACTCTCAGAT CTGCGTCCAT TGCTGCGCAC CTCGATGAAC
GAGAAGTTCA AGATGGACGC CGACGCCGCC ATTGCTGAGA GCCCGGTCGA GATGCAAAAC
CGCTATGACG CCAAAGTGAC CGTCTGGGTC GGCGGGGCGG AGCGGCCCGC ATTTCTTGAT
CAGGCGATCT GGCTGGTGGA AGCCTGGGAT GCGGATCACG TCATCGCCTT TGAAAAACAC
CATTTCAACG TGATCGAACC GCTTGCGGAC CCAGAAAGCG ATCTGGTTGC GGTGATAACC
GCCTGA
 
Protein sequence
MELDDAYANG AYIEGAADYP PRWAASAEDF RNSLQDRARL NLSYGEGDRH KFDLFLPEGT 
PVGLFVFVHG GYWMAFDKSS WSHLAVGALS KGWAVAMPSY ELCPEVRISE ITQQISQAVT
AAAKEIDGPI VLAGHSAGGH LVARMLDPEV LPEAVGARIR NVVPISPLSD LRPLLRTSMN
EKFKMDADAA IAESPVEMQN RYDAKVTVWV GGAERPAFLD QAIWLVEAWD ADHVIAFEKH
HFNVIEPLAD PESDLVAVIT A