Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2492 |
Symbol | |
ID | 4076857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2632860 |
End bp | 2633645 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638007816 |
Product | putative esterase/lipase/thioesterase |
Protein accession | YP_614486 |
Protein GI | 99082332 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0657] Esterase/lipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.377015 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTCG ACGACGCCTA TGCCAACGGA GCCTATATCG AAGGAGCCGC AGACTATCCT CCGCGCTGGG CGGCCTCCGC AGAAGATTTC CGCAACAGTC TGCAGGACCG GGCGCGCTTG AACCTTTCTT ATGGCGAAGG TGACCGACAC AAGTTTGATT TGTTCCTGCC CGAAGGCACC CCCGTGGGGC TGTTTGTCTT TGTGCATGGC GGGTACTGGA TGGCATTCGA TAAATCGAGC TGGTCGCATC TGGCGGTTGG GGCGCTCTCA AAAGGATGGG CGGTGGCGAT GCCGTCATAC GAACTTTGCC CCGAGGTGCG CATTTCCGAG ATCACGCAGC AGATTTCGCA GGCTGTAACG GCAGCTGCAA AAGAGATCGA TGGTCCGATC GTTCTGGCGG GCCACTCCGC CGGGGGGCAT CTGGTTGCGC GGATGCTTGA CCCCGAAGTG CTGCCGGAGG CCGTTGGGGC ACGTATTCGC AACGTTGTGC CGATCTCTCC ACTCTCAGAT CTGCGTCCAT TGCTGCGCAC CTCGATGAAC GAGAAGTTCA AGATGGACGC CGACGCCGCC ATTGCTGAGA GCCCGGTCGA GATGCAAAAC CGCTATGACG CCAAAGTGAC CGTCTGGGTC GGCGGGGCGG AGCGGCCCGC ATTTCTTGAT CAGGCGATCT GGCTGGTGGA AGCCTGGGAT GCGGATCACG TCATCGCCTT TGAAAAACAC CATTTCAACG TGATCGAACC GCTTGCGGAC CCAGAAAGCG ATCTGGTTGC GGTGATAACC GCCTGA
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Protein sequence | MELDDAYANG AYIEGAADYP PRWAASAEDF RNSLQDRARL NLSYGEGDRH KFDLFLPEGT PVGLFVFVHG GYWMAFDKSS WSHLAVGALS KGWAVAMPSY ELCPEVRISE ITQQISQAVT AAAKEIDGPI VLAGHSAGGH LVARMLDPEV LPEAVGARIR NVVPISPLSD LRPLLRTSMN EKFKMDADAA IAESPVEMQN RYDAKVTVWV GGAERPAFLD QAIWLVEAWD ADHVIAFEKH HFNVIEPLAD PESDLVAVIT A
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