Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2396 |
Symbol | |
ID | 4076722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2520607 |
End bp | 2524614 |
Gene Length | 4008 bp |
Protein Length | 1335 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638007718 |
Product | hypothetical protein |
Protein accession | YP_614390 |
Protein GI | 99082236 |
COG category | [S] Function unknown |
COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAACAGA ACCTCCAGAG CCTCATCTTC ACCTGTGGCC TCGCCACCTG CCCGGTCCTG ACTCCCCTGC CCACCCTGGC ACAAGACGCG TCAGAATCTG GCGGCCTCTT GGTGTCCTTT CTCGAGGATA CACTCTCCGG CGACAGCCGC ACGGTGAGTG TCGAGGGTCT GGAGGGCGCG TTTTCCTCGC AGGCAAAGAT CGCCAAGCTA ACCGTCTCTG ACGCAGAGGG CATCTGGTTG ACGGTCGAAG GAGCCGAGCT CGATTGGAAC CGCCTGGCAC TGGTACGCGG ACGCTTTTCG GTCAATCACC TCAAGGCAGA TCGCATAACC GTGGCGCGCA GCCCGGAACC GGTGCCCGCA GACCCGGAAT TGCCCATGCC CGAGGCGACA CCTTTCCGGC TCCCGGAATT GCCTGTGTCA ATTGAGATCG GCGACATCGC CGCAGGTGAA ATCCGGCTTG GCGAAGCCCT GACCGGCCAA GCAGCCTCCC TGTCGGTTGA TGGCGCGCTG ACACTAGCGG ATGGGGCGCT GGAGACCGAC CTCAATGTGG CACGGTTGGA CAGGCGCGGT GACGCGCTCC ATCTTGCGGC GTCTTTTTCC AACACCACCG AACAGCTCGC ACTGGATATT GCGCTCGACG AGGCACCCGG CGGCTTGCTC TCGACCGCGA TGGACTTGCC CGGCCGCCCT GATCTACGCC TCGCCATCAA AGGCGAAGGC TCGCTTACAG ATTTCACGGC AGACATCGGG TTTGCCAGCA ATAGCCACGA CCGCATCACA GGGACCGTGA GCCTGAGAGG CCTGGGAGAT GTCGACAGCG ATACTGATGC GGGGCTGGCG TTCTCGGCAG ACATCGGGGG CGACATAGAC CCGCTGCTCC CGCCCGCATA TCGCCCCTTC TTTGGCCCCG GCATGCGCGC CAATGTCAAA GGGCGCAGCC TGAGCTCTGG CGGTGTCGAA CTTGACAACC TCGTGCTGCG TACCCGCGCC TTGCAACTGA CCGGCGCGCT ACGCCTAGAA GCGGGCATGT TGCAGACCGC CAATATCAAG GCTGCAATCA CAGCGCCCGA GGGGCAAGCC GCGGTAATCC TTCCGGTGTC AGGCGCCGAC ACCACGGTTG CTGCCGTGAC GATGGATTTG AAGAAGCCGG AAGGCGAAAA CTGGACCATC AACGCCGAAC TCGACAGCCT GCGCACAGCA GACCTGAGCA TCAAACGCGC GGTCGTGAAC GCCGCAGGGG CGCTGGACCA AGACGCAGGT TTTAACCTTG ATGGGGCACT TGATGCGCGG CTCAGCGGCT TTGTGCTTTC GGATCCTGCG CTGGCTGCGG CAACCGGCAG CAAACTCAGC CTCAGCGCAC AGCTGACGAC GAAAGACGGC GCCGATTTTC TGGTGCGCGA TCTCGAACTG CAGGGCGACT CTTATAGCGC GCGGGGCGAG TTGCGTTTTG ACAGGCTCGA AGGAGATCTG CGCATCGCCA CCACGCTCAG TCTTCTGGCA GAAAACCTCA GCCGGTATTC GGTGTTGGCC GGGCTGGATC TGTCAGGATC GGCAGAGGCC GATGTGAGCG GGCATTTCCA ACCTCTGAGC GGCGCCTTCG GGGTCGATCT TGCGCTTCTG GGGCGCGATC TTGGCACCGC AATCCCGAAT GTGGACCCGC TCTTGGTGGG AGAGAGCCGC CTGAAACTGG TGGCCGCGCG CGACACGGCT GGAATCCGGA TTGACCAATT TCACCTGCAA ACCGCAGAAG TATCCGCCAC CGGGCAAGGA ACGCTCGATA GTGGCGAAGG CGCGCTGCGC CTTGATGCCA CGCTCGCACG GCTCGACCGG TTTGTGACCG ACCTGCCTGG CCCGCTCACG CTCTCGGCGA ATTTCGACCG CAGTGGCAAC CGTCTCGACG GCACTGTCGC TTTGCGCGGG CCACAGAAAA CCGCGATGGA TCTCGACGGC AGCTTCACGC TTGACGGTGC AGCCGATTTT GGGTTTGAGG CCTTTGTTGG TGCGCCCGAA GCCTTTGTTC CCGAACTCGC TGGGGCGCCG GTGATTGCAA CTGGCACGGC CACTCGGCGC GCGGCGCAAT GGACCGGGGA TATGACGCTC ACTGCCACCG GCGGTACGCG CGCCCGGATC AAGGGGGGAT TTCATGAGGC CGACGGCGCG ATCGACCTTG ATCTCTCCGC GCTGTTGGCG CGAGTGGAGC AATTTGCCCC TGCCATCACC GGTCAGGCCA CGGCAAGACT GATCGCATCC CGGCGGGACG GTCAGTGGCA GGCCAAAGGT GATGTCACGG CCCCCGGCGA TACCACCGCA ACTTTTGACG CAGGCTTTGT TGAAACCTCG GGCGATCTTG ATCTCAAGCT GAAGGCGGAG GTGGCAGAAG TGCGCGCCTA CGCGCCAACG CTTCCAGGGC GGGCCTCAGC GGATATTTCC GCTACCCGGC GGGCTGGCGC ATGGGCGGCA GGGGGCAAGG TTACAGGGCC CGCAGGAACG GCGGCTGACC TCGATGTCGA GCTCAGTGAA ACCGATGGCA CGGCCCGCGT CCGCTTTGAC GCCCTGGTGC GCGAGCTACA GCAGATTGTA CCAGGGCTGG ACGGGGCACT GAGCGCGAAG GGGGAAGCCC GCCGCGCAGA TGGTATCTGG ACCGTCGAGA GCACCGCAGA CGGCCCACTT GGAATGGCCT CACGGCTGGC TGGAACATGG GATGAGGCGC GGGCAATCGC GGATGTCTCG GCCAAGGGAA CGTTGCGGCT GGAAGGGGCC AACGCCTTTT TGAAGCCTAA TCTCATCAAG GGGCTGGCCG AATTTGATCT CGCACTGCGC GGGCCGGCGC AACTCAATTC GGTGAGCGGC ACAATCACCA CATCCGGCGC GCAGATGGTT CTGCCCCAAG CAGCGCAGAC CATCGAGGGG ATCTCCACCC GTATCTCGTT GAATAGTGGT TCCGCCGCCG TGAATCTTTC GGCCCGTCCG CGTGACGGCG GGCGCATCGA GGTCAATGGC CCGGTCTCTC TTGCCGCGCC TTATGCAGGG GATCTGCGGA TCTCGCTCGC TGACGTGGTG CTGACCGACA ACCTGTCATT TGACACCTCC CTTGGCGGGC AGCTGCGCTT TTCGGGCGCG CTTGCGGGAA ACAGTCGCCT CTCCGGGCGG ATCGACATTG GCGAAACCAA CTTCAACCTC AACACAGCCG GGGGCGCTGT ATCAGCCGCG CCCATTCCGC CAATTCGCCA CGTCGGCCAA ACGGGCGCAC AGATCGCAAC CAGAGCCCGC GCCGGCTTGA TTGAGACGGG ATCTGCGGCT TCCAAGAGCA ACAGCAATAT CGCACTTGAT GTGCTTATCA GTGCGCCAAA CAAGATCTTT GCGCGGGGCC GCGGGCTCAA TGCGGAACTG GGCGGCACAA TCGCGGTGGG TGGCACCACC GCCAATCTTG CGCCTTCCGG GCAAGTGGGT CTGATCCGTG GCACCTTTGA CATTCTGGGG CGCAGGCTGA ACCTCGACGA AGGGCGCGTG ACGCTCTTGG GCGACCTCAA GCCCTATCTG GAGTTTGTCT CGAGCGCCAA TACCGAACAG GGCACTGCCA CCCTCTCTAT TGCCGGTCCC CTCGATGGCC CGCAGATCAA AGTCACATCA GAGCCACCTC GACCAAGCGA AGAGGCGCTG GCCCTGCTGC TGTTTGGGGA CAACATCCAA GACATTTCAC CGCTCGCGCT TGCGCGGCTG GCCAGTTCTG CCCTGACACT GAGCGGTCGC GGCGGTGGCG CGAACAAGGC GCTGCGTGAC AGCACCGGCG CCGACAATGC AGATATTGGC ATCGACAATC TCGGCGTGGG GCAGCTGGGG CTTGGCGGGT ATCTTGCGGA CAACGTGTAC ACGGACGTGA ACGTGACCGC CGAGGGCAAC AGCGAACTGT CGATCAACCT CGACCTTACC AAATCCCTCA CCGTGGCCGG CAAGGCCGAT AGCGAAGGCG AGACGGGGCT CGGGGTGTAT TTCAAGCGGG ATTATTAA
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Protein sequence | MKQNLQSLIF TCGLATCPVL TPLPTLAQDA SESGGLLVSF LEDTLSGDSR TVSVEGLEGA FSSQAKIAKL TVSDAEGIWL TVEGAELDWN RLALVRGRFS VNHLKADRIT VARSPEPVPA DPELPMPEAT PFRLPELPVS IEIGDIAAGE IRLGEALTGQ AASLSVDGAL TLADGALETD LNVARLDRRG DALHLAASFS NTTEQLALDI ALDEAPGGLL STAMDLPGRP DLRLAIKGEG SLTDFTADIG FASNSHDRIT GTVSLRGLGD VDSDTDAGLA FSADIGGDID PLLPPAYRPF FGPGMRANVK GRSLSSGGVE LDNLVLRTRA LQLTGALRLE AGMLQTANIK AAITAPEGQA AVILPVSGAD TTVAAVTMDL KKPEGENWTI NAELDSLRTA DLSIKRAVVN AAGALDQDAG FNLDGALDAR LSGFVLSDPA LAAATGSKLS LSAQLTTKDG ADFLVRDLEL QGDSYSARGE LRFDRLEGDL RIATTLSLLA ENLSRYSVLA GLDLSGSAEA DVSGHFQPLS GAFGVDLALL GRDLGTAIPN VDPLLVGESR LKLVAARDTA GIRIDQFHLQ TAEVSATGQG TLDSGEGALR LDATLARLDR FVTDLPGPLT LSANFDRSGN RLDGTVALRG PQKTAMDLDG SFTLDGAADF GFEAFVGAPE AFVPELAGAP VIATGTATRR AAQWTGDMTL TATGGTRARI KGGFHEADGA IDLDLSALLA RVEQFAPAIT GQATARLIAS RRDGQWQAKG DVTAPGDTTA TFDAGFVETS GDLDLKLKAE VAEVRAYAPT LPGRASADIS ATRRAGAWAA GGKVTGPAGT AADLDVELSE TDGTARVRFD ALVRELQQIV PGLDGALSAK GEARRADGIW TVESTADGPL GMASRLAGTW DEARAIADVS AKGTLRLEGA NAFLKPNLIK GLAEFDLALR GPAQLNSVSG TITTSGAQMV LPQAAQTIEG ISTRISLNSG SAAVNLSARP RDGGRIEVNG PVSLAAPYAG DLRISLADVV LTDNLSFDTS LGGQLRFSGA LAGNSRLSGR IDIGETNFNL NTAGGAVSAA PIPPIRHVGQ TGAQIATRAR AGLIETGSAA SKSNSNIALD VLISAPNKIF ARGRGLNAEL GGTIAVGGTT ANLAPSGQVG LIRGTFDILG RRLNLDEGRV TLLGDLKPYL EFVSSANTEQ GTATLSIAGP LDGPQIKVTS EPPRPSEEAL ALLLFGDNIQ DISPLALARL ASSALTLSGR GGGANKALRD STGADNADIG IDNLGVGQLG LGGYLADNVY TDVNVTAEGN SELSINLDLT KSLTVAGKAD SEGETGLGVY FKRDY
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