Gene TM1040_2355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2355 
Symbol 
ID4076474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2475902 
End bp2477209 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content59% 
IMG OID638007677 
Producthypothetical protein 
Protein accessionYP_614349 
Protein GI99082195 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0606] Predicted ATPase with chaperone activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.896698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.762473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGC AGAACCAGAC GGTCATGGCT CCCCCGCCCC CCAAGGGGCT GGCAGAAATG 
CGTCTGCCAC TGGTGATGAT GCGGGACATC CTGCTGAAGA CGATGTTTCG AAAGAACCTC
GACATGGTGA CCGATCTGGC CGGCGCGATC TGCCTGCCGA CGTCTGTCAC CCAAGAGCTT
GTCGACCTCG CGCGTGGCCA GAAGCTCCTT GAGGCCACAG GGACCCTCAA TGCCAATTCC
GGCAATGAGA TGGGCTATCA GCTGACCGAC GCGGGCAAGG CCCGCGCGCT CGATGCGCTG
TCGCAGTCGG AATATTTTGG CGCAATGCCG GTGCCGCTTG ACGTGTACCG CGAACAGGTA
AAGCGCCAGT CGATCCGCAA TATCATGGTG ACGCGCCAGC AGCTTACTTC GGCCATGGGC
CACCTGATCC TGCCCGACAG CCTCCTGGAC CACCTCGGCC CCGCCGTAAG CGCAGGCCGG
TCGATCCTGA TGTATGGTCC ACCCGGCAAC GGGAAATCCT CTATTTCCAA TGGCATCCGG
GACGCGCTTG GTGACCGGGT CTATGTGCCC CGCGCGATTG AATACGCCGG CCAGGTCATC
ACGGTGTACG ATCCGATCGT CCACACCGAG GTCGCAGCAG AGCCCGTGGA CCCCAATGCC
CTGCGCAAGC GGCGCCGTTT TGACGAACGC TATGTCTGCT GCGAGCGCCC CACAGTGGTC
ACAGGCGGCG AGCTATCGTT GTCGATGCTG GATCTCGTCT ACAACCCCAC CGCGCGCACC
TATCAGGCCC CGTTGCAACT CAAGTCGACC GGCGGCATTT TCATCGTCGA CGACCTTGGA
CGCCAGGCCG AGAGCCCGCA GGCCCTGGTC AACCGCTGGA TCGTCCCTCT GGAGGAAAGC
AAAGATATCC TCGCGCTGCA ATCGGGTGAA AAATTCGAAG TCCCCTTTGA CACGCTGGTG
ATCTTCTCCA CCAACTTCCA CCCCAATGAG ATCTTCGATC AGGCGGCCCT GCGCCGCATC
TTCTTCAAGA TCAAAATCGA CGGGCCGGAT CAGGAAAACT TCCTCAAGAT CTTTGCCATG
GTGGCGCGCA AGAAAGGCAT GCCCCTCGAT GAGGCCGCGC TGGTGCATCT TCTGAAGACG
AAATACCCCA CCATCGACAA TGTCTACGCA AACTATCAGC CGGTGTTCCT GATCGACCAG
ATGATCTCCA TCTGCGAGTT CGAAGGCATC CCCTATCAGA TGTCGCCAGA ACTGATCGAC
CGCGCTTGGG CAAACATGTT TGTCAGAGAC GAAGTCATCG TCAAATAG
 
Protein sequence
MNMQNQTVMA PPPPKGLAEM RLPLVMMRDI LLKTMFRKNL DMVTDLAGAI CLPTSVTQEL 
VDLARGQKLL EATGTLNANS GNEMGYQLTD AGKARALDAL SQSEYFGAMP VPLDVYREQV
KRQSIRNIMV TRQQLTSAMG HLILPDSLLD HLGPAVSAGR SILMYGPPGN GKSSISNGIR
DALGDRVYVP RAIEYAGQVI TVYDPIVHTE VAAEPVDPNA LRKRRRFDER YVCCERPTVV
TGGELSLSML DLVYNPTART YQAPLQLKST GGIFIVDDLG RQAESPQALV NRWIVPLEES
KDILALQSGE KFEVPFDTLV IFSTNFHPNE IFDQAALRRI FFKIKIDGPD QENFLKIFAM
VARKKGMPLD EAALVHLLKT KYPTIDNVYA NYQPVFLIDQ MISICEFEGI PYQMSPELID
RAWANMFVRD EVIVK