Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2355 |
Symbol | |
ID | 4076474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2475902 |
End bp | 2477209 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638007677 |
Product | hypothetical protein |
Protein accession | YP_614349 |
Protein GI | 99082195 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0606] Predicted ATPase with chaperone activity |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.896698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.762473 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACATGC AGAACCAGAC GGTCATGGCT CCCCCGCCCC CCAAGGGGCT GGCAGAAATG CGTCTGCCAC TGGTGATGAT GCGGGACATC CTGCTGAAGA CGATGTTTCG AAAGAACCTC GACATGGTGA CCGATCTGGC CGGCGCGATC TGCCTGCCGA CGTCTGTCAC CCAAGAGCTT GTCGACCTCG CGCGTGGCCA GAAGCTCCTT GAGGCCACAG GGACCCTCAA TGCCAATTCC GGCAATGAGA TGGGCTATCA GCTGACCGAC GCGGGCAAGG CCCGCGCGCT CGATGCGCTG TCGCAGTCGG AATATTTTGG CGCAATGCCG GTGCCGCTTG ACGTGTACCG CGAACAGGTA AAGCGCCAGT CGATCCGCAA TATCATGGTG ACGCGCCAGC AGCTTACTTC GGCCATGGGC CACCTGATCC TGCCCGACAG CCTCCTGGAC CACCTCGGCC CCGCCGTAAG CGCAGGCCGG TCGATCCTGA TGTATGGTCC ACCCGGCAAC GGGAAATCCT CTATTTCCAA TGGCATCCGG GACGCGCTTG GTGACCGGGT CTATGTGCCC CGCGCGATTG AATACGCCGG CCAGGTCATC ACGGTGTACG ATCCGATCGT CCACACCGAG GTCGCAGCAG AGCCCGTGGA CCCCAATGCC CTGCGCAAGC GGCGCCGTTT TGACGAACGC TATGTCTGCT GCGAGCGCCC CACAGTGGTC ACAGGCGGCG AGCTATCGTT GTCGATGCTG GATCTCGTCT ACAACCCCAC CGCGCGCACC TATCAGGCCC CGTTGCAACT CAAGTCGACC GGCGGCATTT TCATCGTCGA CGACCTTGGA CGCCAGGCCG AGAGCCCGCA GGCCCTGGTC AACCGCTGGA TCGTCCCTCT GGAGGAAAGC AAAGATATCC TCGCGCTGCA ATCGGGTGAA AAATTCGAAG TCCCCTTTGA CACGCTGGTG ATCTTCTCCA CCAACTTCCA CCCCAATGAG ATCTTCGATC AGGCGGCCCT GCGCCGCATC TTCTTCAAGA TCAAAATCGA CGGGCCGGAT CAGGAAAACT TCCTCAAGAT CTTTGCCATG GTGGCGCGCA AGAAAGGCAT GCCCCTCGAT GAGGCCGCGC TGGTGCATCT TCTGAAGACG AAATACCCCA CCATCGACAA TGTCTACGCA AACTATCAGC CGGTGTTCCT GATCGACCAG ATGATCTCCA TCTGCGAGTT CGAAGGCATC CCCTATCAGA TGTCGCCAGA ACTGATCGAC CGCGCTTGGG CAAACATGTT TGTCAGAGAC GAAGTCATCG TCAAATAG
|
Protein sequence | MNMQNQTVMA PPPPKGLAEM RLPLVMMRDI LLKTMFRKNL DMVTDLAGAI CLPTSVTQEL VDLARGQKLL EATGTLNANS GNEMGYQLTD AGKARALDAL SQSEYFGAMP VPLDVYREQV KRQSIRNIMV TRQQLTSAMG HLILPDSLLD HLGPAVSAGR SILMYGPPGN GKSSISNGIR DALGDRVYVP RAIEYAGQVI TVYDPIVHTE VAAEPVDPNA LRKRRRFDER YVCCERPTVV TGGELSLSML DLVYNPTART YQAPLQLKST GGIFIVDDLG RQAESPQALV NRWIVPLEES KDILALQSGE KFEVPFDTLV IFSTNFHPNE IFDQAALRRI FFKIKIDGPD QENFLKIFAM VARKKGMPLD EAALVHLLKT KYPTIDNVYA NYQPVFLIDQ MISICEFEGI PYQMSPELID RAWANMFVRD EVIVK
|
| |