| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2151 |
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| Symbol | |
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| ID | 4076750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2258932 |
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| End bp | 2260680 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638007471 |
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| Product | hypothetical protein |
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| Protein accession | YP_614145 |
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| Protein GI | 99081991 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4961] Flp pilus assembly protein TadG |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.940031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0926842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTAA ACTTCTGGAC TTCATCGGCC CTGACCGGTG CGCTCGGTCG CCGGGCCATT
GTGGACCGCA TGCGTCAGTT TCGCAGGGAC GAAAGTGGTG TCCTTGCCAA GCCGATGATT
ATGATCGTGG TCTTGATGTT CATGATCGGC GGTCTGGGTA TGGATATGGT ACGCCTCGAA
CGCGACCGTA CCAAACTGCA ATACACTCTG GACCGCGCGG TACTTGCGGC AGCGGATCTC
GACCAGCCCC TCGATCCCGA GGCAGTGGTT CTCGATTACA TGTCAAAGTC GGGCCTTGGC
GATTACACCA CGGTGGTCGT CCCTGAGGTT TCACCCACGG CAAAGCGCGT AAAGGCGAGC
GTCGATACCA ATTTCACTGC ATCCTGGATG AACAACGTCT TTTACGACGA CTACATCCGC
AATCCCGATA CTTACCAGCT TGAGCCAATC ACACTCCCGC TGCTGGCGTC CTCAACGGCG
GTGGAGAGCA TCGGCAACGT CGAGATCTCG CTGGTGCTGG ACGTCTCGGG ATCGATGCGC
AGCAATGATC GCCTGGTGAA CCTCAAACGC GCCGCCAAAG AGTTCGTCCA GACGATGGAT
GACAACACCG AAGACGGCAA GATGAGCATT TCCATCGTGC CCTACTCGAC ACAGGTTTCC
ATGCCGGAGG CCTTTCTTGA TGAGTTGAAC GTCAGCAGCG AGCACGATTA CTCCCACTGC
ATCAACTTCT CGGGGTCCGA TTTCAACAAC GCCGGGATCA GCACGACCCA GGCCTACGAG
CGCACCATGC ACTTCACCGT CTGGAACAGC GGCGACTATC GCTCAAGAAC CCGCCTCGTT
CGTCAGCCGA CCTGTGCCGC CCATTCCGAC AACCCAGAGC GCACCGCGCT GTTGTTGTCG
GACAATGTCA CGCAGCTGCA AAACTACATC GACGCCTTTG TCCCATCCGA GAACACATCG
ATTGACCTCG GCATGAAATG GGGCTCTGCC CTTCTCGACC CATCCGTGCA GCCCGTGATT
GCCTCGCTGG CTGATGATGC AAATCCCAAT CAGTCCATCG CATCGCGCTT TGCCAACCGT
CCCGTCCCCT ACACGGATAC AGAGACGCTG AAGGTGATCG TGATGATGAC CGACGGTCAG
AATACGTCGC AGTACTACCT CAGGAACAGC TACCGCGAGG GCGACAGCCC GGTTTGGTAC
AACGCCCAAG AGCGTGTTTA TTCCACCTAT GACCCCAACC GCGGTTCAAA ACCCTATTAC
TGGGACAACT TGCAGCGGTG GGCGGATCAC CCCTATGGCA ACGGCACCTA CGAGGAAACC
TACTGCACCG GCACGCTCTA CTACGGCAAC TGCTATTACG GGTCCTGGCA GACCCGCACC
GTGGACGAGC CCGGCACGGC CGTACAGCTG AGCTATCCTG ATCTCTTTGC CGACACCTCG
CTCAGGTATC TGCGGGATCG CCTGTTCGGC GACTGGATGA GCAACGCGAA TTACTACTGG
TTCTCCGGTC TGTTCAGCTC TGTCGGCTCC ACGACAAAGG ACGCGCGCAC GCTGGACATC
TGTGAAGCGG CCAAAGCCAA GGGCGTTGTG GTCTTTACCA TCGGGTTTGA GGCTCCGAGT
CGAGGCCAGG AAGTCCTGCA GGCCTGCGCA AGCTCTGCAT CCCATTACTA CGATGTTGAC
GGGCTGGAGA TCTCCGATGC CTTCGCTTCA ATTGCCTCCG CGATCCGCCA ACTGAGGCTG
ACAGAATGA
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| Protein sequence | MKVNFWTSSA LTGALGRRAI VDRMRQFRRD ESGVLAKPMI MIVVLMFMIG GLGMDMVRLE
RDRTKLQYTL DRAVLAAADL DQPLDPEAVV LDYMSKSGLG DYTTVVVPEV SPTAKRVKAS
VDTNFTASWM NNVFYDDYIR NPDTYQLEPI TLPLLASSTA VESIGNVEIS LVLDVSGSMR
SNDRLVNLKR AAKEFVQTMD DNTEDGKMSI SIVPYSTQVS MPEAFLDELN VSSEHDYSHC
INFSGSDFNN AGISTTQAYE RTMHFTVWNS GDYRSRTRLV RQPTCAAHSD NPERTALLLS
DNVTQLQNYI DAFVPSENTS IDLGMKWGSA LLDPSVQPVI ASLADDANPN QSIASRFANR
PVPYTDTETL KVIVMMTDGQ NTSQYYLRNS YREGDSPVWY NAQERVYSTY DPNRGSKPYY
WDNLQRWADH PYGNGTYEET YCTGTLYYGN CYYGSWQTRT VDEPGTAVQL SYPDLFADTS
LRYLRDRLFG DWMSNANYYW FSGLFSSVGS TTKDARTLDI CEAAKAKGVV VFTIGFEAPS
RGQEVLQACA SSASHYYDVD GLEISDAFAS IASAIRQLRL TE
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