| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1922 |
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| Symbol | |
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| ID | 4076873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2023619 |
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| End bp | 2024221 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007238 |
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| Product | DNA-3-methyladenine glycosylase I |
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| Protein accession | YP_613917 |
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| Protein GI | 99081763 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2818] 3-methyladenine DNA glycosylase |
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| TIGRFAM ID | [TIGR00624] DNA-3-methyladenine glycosylase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.98355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCGCG TTGTTACAGG CGGGGATGGC CGCACGCGCT GCGCCTGGTC TGCCTCGGCC
CCGGAGTTTG ACGCCTACCA TGACACAGAG TGGGGTTTCC CCGTGGGGGA TGACCGGCGG
CTCTTTGAAA AGATCTGCCT TGAGAGTTTC CAATCTGGGC TGAGCTGGCG CACGATCCTA
GCCAAGCGCG AGAATTTTCG CGCTGCCTTT GATGGTTTCG ACTATCACGC GATGGCGGCC
TACGGACCTG AAAAGGTCGC GGCGCTGCTG CAAGATGCGG GGATCATTCG TCATCGCGGC
AAGATCGAGG CGGTGATCAA CAACGCAGCG CGTGCGGTGG AGATGGAGCA AAGCGAGGGC
GCGCTCGCGG CGTTTTTCTG GCGTTACGAG GTGGAGACCC CACCCGAGCC GCAGACGGTC
TCGACCTGTC CTGAATCGGT GGCCCTGTCA AAAGAGCTGA AGACGCGCGG CTGGAAATTT
GTCGGACCTA CGACCTGTTT TGCCTTCATG CAGGCCATGG GGCTGGTGAA TGACCACGCG
GAGGGCTGCT ATTGCCGCCC GATCGCGGCC GCAGCTCGTC AGGGTTTTGC CAAACCGGTC
TGA
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| Protein sequence | MSRVVTGGDG RTRCAWSASA PEFDAYHDTE WGFPVGDDRR LFEKICLESF QSGLSWRTIL
AKRENFRAAF DGFDYHAMAA YGPEKVAALL QDAGIIRHRG KIEAVINNAA RAVEMEQSEG
ALAAFFWRYE VETPPEPQTV STCPESVALS KELKTRGWKF VGPTTCFAFM QAMGLVNDHA
EGCYCRPIAA AARQGFAKPV
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