Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1824 |
Symbol | |
ID | 4076970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1919245 |
End bp | 1920081 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638007139 |
Product | hypothetical protein |
Protein accession | YP_613819 |
Protein GI | 99081665 |
COG category | [R] General function prediction only |
COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.044813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.779057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCGCA AACTCCTGCT CATCATCCTT GATGGCGTGC CCCATCGCAA TTTTCGCCGC CTGTTTGGCA ACCTCGAGGG CTGGGTCGCC TCTGGTGATG CCCGCGTCTG GAAGCACCGC GCGGTGCTGC CCTCGATCTC CGCAAGCTGC TATGCCTCAA TCCACACGGG CGTCACCCCG CAGGAGCATG GCTGCACCGG CAATGGCAAT GTCTTCCGCC TGAGCCACGA CGATGTGTTT TCCCAAGTGC GCAAGGCCGG CGGCACCACC GGGGCGGTCG CGCATAGTTT CTGGTCGGAG TTCTTCAATC GCTCCCCCTT CGATTATGTG CGCGACATCG AATATGACGA GCCCGAAAGC AAGACCATCA ACCATGGGCG CTTTCACTCG ATGACGGGCT ATGGCCACGA CAACCAGATG ACGCCCTCGG ATGTGGATCT CTTTGCCACG CTCACCAACC TCTGCGGGCG CTTTGATCTC GACTACGGCA TGTTGCACAC CTGCACGCTC GACAGCATGG GGCATCGCTT CTTTCACGAA AGTGCCGAGA TGGACAAAGC CTGCTTTGTG ATGGACGAGA TGCTGGCGCC GTTCATCCCG CGCTGGCGTG CCATGGGCTA TGAGGTGATC GTGACCGCCG ACCATGGTCA GGACGAGCGT GGCCACCACG GCGGGCGCCA CCCGCTGCAA CAGGAAACCG CGCTGTATTA CTTTGGCGAT GCGGATGGCC CGGCAGAGAA TGACGTGATC GACCAGTTGC AACTGGCCCC CACAATCCTG AGCCGCCTTG GCGCGCCCCT TGCAGAGACC ATGAAAGCCG AGGCATTCTT GCGCTGA
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Protein sequence | MDRKLLLIIL DGVPHRNFRR LFGNLEGWVA SGDARVWKHR AVLPSISASC YASIHTGVTP QEHGCTGNGN VFRLSHDDVF SQVRKAGGTT GAVAHSFWSE FFNRSPFDYV RDIEYDEPES KTINHGRFHS MTGYGHDNQM TPSDVDLFAT LTNLCGRFDL DYGMLHTCTL DSMGHRFFHE SAEMDKACFV MDEMLAPFIP RWRAMGYEVI VTADHGQDER GHHGGRHPLQ QETALYYFGD ADGPAENDVI DQLQLAPTIL SRLGAPLAET MKAEAFLR
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