Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1484 |
Symbol | |
ID | 4077781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1585984 |
End bp | 1586757 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 638006797 |
Product | glycosyl transferase family protein |
Protein accession | YP_613479 |
Protein GI | 99081325 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAGT CCGTATCCAT TGTCATCCCG ACGTTTAACC GCGCAGAGAT GCTCCCCAAG GCGATCGACA GCGCCTTGGC GCAGACCCAT AGCTGCGAGG TGATTGTGGT CGACCATGGG TCCACCGACA GCACCCCCGA GGTGGCAGCC TCTTATGGCG ACAAGATCAC CTATGTGCGG CGCGATCGCG ATTTTGGACC ACATTTCTGC TGGTTGGATG GCATTTTGCA TGCAAACAGC ACCTATGTTC ATCTGCAATA TGACGACGAT TGGATCGCCG AGACCTTTAT CGAAAAGTGC CTGAGTGTCA TGGGTGAGGA TGTGGGCTTT GCCTTCAGTG GGGCCGAAGT GATCGACGAT AAGAGCGGTC GCCAGATGAT GACGCAGTTT CTGGAATGGC TGCCCCAGAC CGGCACTTTC GACAATCATC TCGCCGAGGA GAAAATCGTC GGCTCGCTGA TTTCGCCGGG TGCGGCGCTC TTTCGTAAGC AGGTGCTGAT CGATGCGCTT TATCAGGGCC GCCTGCCACT GCAGACCAGT GAGTATCATG GGGTGGGGCC AGATATTTTT GCCTCACTCC TGTCGATGTT GCGCTACCCG CGTGTCGGAT TTGTCAAGGA GCCCCTTGCC AGTTTCCGCG CCCATGACGG CAGCATCACC ATCGATGCAT TCAAGGATGC ACAAAAGAAA CGCGACATTG CGGCCGCCTA CAACGAGGTG CGCGCCTACT ATGTCGAATT GAAAGCCATG CAGATGGTGA GGGCCGCGCA GTGA
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Protein sequence | MTESVSIVIP TFNRAEMLPK AIDSALAQTH SCEVIVVDHG STDSTPEVAA SYGDKITYVR RDRDFGPHFC WLDGILHANS TYVHLQYDDD WIAETFIEKC LSVMGEDVGF AFSGAEVIDD KSGRQMMTQF LEWLPQTGTF DNHLAEEKIV GSLISPGAAL FRKQVLIDAL YQGRLPLQTS EYHGVGPDIF ASLLSMLRYP RVGFVKEPLA SFRAHDGSIT IDAFKDAQKK RDIAAAYNEV RAYYVELKAM QMVRAAQ
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