Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1250 |
Symbol | |
ID | 4076365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1344152 |
End bp | 1344583 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 638006558 |
Product | hypothetical protein |
Protein accession | YP_613245 |
Protein GI | 99081091 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.284687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAAC ATGTACTTTG CGCCATCGAC CTGACGCATA TGGACGCGGA AGAGACCTTG CTGAAGCGCG CAGCAGAGCT TGCGGAATTC TACGGTGCCA CGCTGAGCGT GGTGACCGTG GTCCCGGACT ACGGCATGAG CATTGTGGGA TCGTTTTTCA AGGACGGCAC CATGAAAGAG GCAGTCAAAG AAGCGGACCG CCAATTGCAT GCCTATGTCA AAAAGGTCGT GCCGGACATG AAGGACGTGC AGCACATCGT TGAAGTCGGG GCAAATGTCT ACGAGATGAT CCTGGATGCG ATCAAACGCT CCGAAGCAGA TCTCGTCGTG ATGGGCGCGC ATAAACCTGA GTTGATGGAT CGACTACAAG GTCCAAACTC AGCACGCGTG GCGCGCTACG CACCATGTTC GGTGCTGATC GTGCGAGACT GA
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Protein sequence | MTKHVLCAID LTHMDAEETL LKRAAELAEF YGATLSVVTV VPDYGMSIVG SFFKDGTMKE AVKEADRQLH AYVKKVVPDM KDVQHIVEVG ANVYEMILDA IKRSEADLVV MGAHKPELMD RLQGPNSARV ARYAPCSVLI VRD
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