| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1200 |
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| Symbol | |
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| ID | 4076335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1290983 |
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| End bp | 1291579 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006507 |
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| Product | 50S ribosomal protein L21/unknown domain fusion protein |
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| Protein accession | YP_613195 |
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| Protein GI | 99081041 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCAG TCCTCAAGAC TGGCGGCAAG CAGTACAAAG TTCAGGCGGG CGATATGCTC
CGCGTTGAGA AACTGGCTGC AGACGCTGGC GAAACCGTCC AATTCAATGA CGTTCTGATG
ATCGGTGGCG ATGCCCCCGT CGTTGGTGCT CCGTTTGTGT CCGGCGCTGC CGTGCAGGCG
GAAGTGGTCG AACAGATCAA AGGTGACAAG GTCATCAAGT TCGTCAAGCG TCGCCGTAAG
CACTCCTCCA AGCGGACTGT CGGTCACCGT CAGAAGCTGA CCCTGGTCAA GATCACCGAG
ATCCTGGCTT CTGGTGCGGA TGCATCCGGC GTGAAAGCGG CAACCGGCAA AGGCGAGGCG
GCTCCTGCTG CCAAAGCGGC GCCGAAAGCC AAAGCTGCTG CACCTGCAGC CGCAGGCTCC
GACGATCTGA CCCAGCTGAC CGGTGTTGGC CCTGCCGCCG CCAAGAAGCT GGAGGCCGCT
GGCCTCACCA CCTTCGCTCA GATCGCAGCC TTGTCTGAAG ACGACATTGC TGGTATCGAC
GCCATCAAGA TCAAACCCGA ATGGGTTGAG CAGGCCAAAG AGCTGGCTCA AGGCTAA
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| Protein sequence | MFAVLKTGGK QYKVQAGDML RVEKLAADAG ETVQFNDVLM IGGDAPVVGA PFVSGAAVQA
EVVEQIKGDK VIKFVKRRRK HSSKRTVGHR QKLTLVKITE ILASGADASG VKAATGKGEA
APAAKAAPKA KAAAPAAAGS DDLTQLTGVG PAAAKKLEAA GLTTFAQIAA LSEDDIAGID
AIKIKPEWVE QAKELAQG
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