Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1095 |
Symbol | |
ID | 4077802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1173877 |
End bp | 1174455 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638006399 |
Product | hypothetical protein |
Protein accession | YP_613090 |
Protein GI | 99080936 |
COG category | [S] Function unknown |
COG ID | [COG3803] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGCCC CTGAAGAGAT CCTGAAATTC TGGCTCGATG AGGTCGGAGA ATCAGGGTGG TACCGTCAAG ATGATGCGTT GGATGCTGAA ATCCGCAAGC GGTTCGAGCA GGCCTGGATC AACGCCTGCG AAGGCAGCTA CTCGCTCTGG CTCACCTATC CCAGCGGCAC CTTGGCGTAT ATCATCCTCA CCGATCAGTT CCCGCGCAAC ATGTTCCGTG GTCAGGGCAA AGCCTTTGAA TCAGACCATA TCGCGCTGGC GGTGGCCAAG GCTGCGGTGG ATCGCAAATG GGATCTCAAG ATCAACGAAC CCGCGCGGCA ATTCTTTTAC CTGCCTATGA TGCACTCCGA GAGCCTCTGT GATCAGGAAC GCTGCGTGCG GCTGATCCAC GAACGGCTCG ACAAGACGGG CGCGCAGAAC CTCCTGCATG CGCGCGCGCA CCGTGAGGTG ATCCGTCTCT TTGGCCGCTT CCCCTATCGC AATGATGCGC TCGCGCGTCA CAGCACCGCC CCCGAACGTG ACTATGTGAG CGCGGGCGGC TATGGCTCTA CCGTGCGAGA GCTGCAGGCC TACGCCTGA
|
Protein sequence | MAAPEEILKF WLDEVGESGW YRQDDALDAE IRKRFEQAWI NACEGSYSLW LTYPSGTLAY IILTDQFPRN MFRGQGKAFE SDHIALAVAK AAVDRKWDLK INEPARQFFY LPMMHSESLC DQERCVRLIH ERLDKTGAQN LLHARAHREV IRLFGRFPYR NDALARHSTA PERDYVSAGG YGSTVRELQA YA
|
| |