Gene TM1040_1095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1095 
Symbol 
ID4077802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1173877 
End bp1174455 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content60% 
IMG OID638006399 
Producthypothetical protein 
Protein accessionYP_613090 
Protein GI99080936 
COG category[S] Function unknown 
COG ID[COG3803] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCC CTGAAGAGAT CCTGAAATTC TGGCTCGATG AGGTCGGAGA ATCAGGGTGG 
TACCGTCAAG ATGATGCGTT GGATGCTGAA ATCCGCAAGC GGTTCGAGCA GGCCTGGATC
AACGCCTGCG AAGGCAGCTA CTCGCTCTGG CTCACCTATC CCAGCGGCAC CTTGGCGTAT
ATCATCCTCA CCGATCAGTT CCCGCGCAAC ATGTTCCGTG GTCAGGGCAA AGCCTTTGAA
TCAGACCATA TCGCGCTGGC GGTGGCCAAG GCTGCGGTGG ATCGCAAATG GGATCTCAAG
ATCAACGAAC CCGCGCGGCA ATTCTTTTAC CTGCCTATGA TGCACTCCGA GAGCCTCTGT
GATCAGGAAC GCTGCGTGCG GCTGATCCAC GAACGGCTCG ACAAGACGGG CGCGCAGAAC
CTCCTGCATG CGCGCGCGCA CCGTGAGGTG ATCCGTCTCT TTGGCCGCTT CCCCTATCGC
AATGATGCGC TCGCGCGTCA CAGCACCGCC CCCGAACGTG ACTATGTGAG CGCGGGCGGC
TATGGCTCTA CCGTGCGAGA GCTGCAGGCC TACGCCTGA
 
Protein sequence
MAAPEEILKF WLDEVGESGW YRQDDALDAE IRKRFEQAWI NACEGSYSLW LTYPSGTLAY 
IILTDQFPRN MFRGQGKAFE SDHIALAVAK AAVDRKWDLK INEPARQFFY LPMMHSESLC
DQERCVRLIH ERLDKTGAQN LLHARAHREV IRLFGRFPYR NDALARHSTA PERDYVSAGG
YGSTVRELQA YA