Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1084 |
Symbol | pgk |
ID | 4076317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1159751 |
End bp | 1160941 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638006388 |
Product | phosphoglycerate kinase |
Protein accession | YP_613079 |
Protein GI | 99080925 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTGGA AGACACTCGA CGACATGGAT CTGCAAGGCA AAAGCGTTTT GACCCGCGTG GATATCAACG TCCCGATGGA AGACGGCAAA GTCACCGATG ACACCCGCAT CCGCCGCCTC GTGCCGACGA TTTCCGACCT GCTCTCCAAG GGTGCAAAAC CTGTGCTGCT GGCGCATTTT GGCCGCCCGA AGGGCAAGGT GGTGCCCGAG ATGTCGTTGC AGCCGCTGGT CCCCGCGCTG GAGGCCGCCT TTGGCGCGCC GGTGATGTTT GTGGCCGATT GCCGAGGCCC CGCTGCAAAA GGCGCCGTTG ACGCGCTCGC GCCCGGGCAG ATCCTGCTCC TTGAGAACAC GCGCTTTTAT CCCGGCGAAG AACAAAACGA TGCCGATCTC GCCAAAGAGA TGGCCGCGCT TGGTGATATC TACTGCAATG ATGCCTTCTC TGCCGCCCAC CGCGCCCATG CCTCCACCGA GGCGCTGGCG CGCCTGCTGC CTGCCTGCGC GGGCCGCCTG ATGGAGGCAG AACTGAAAGC GCTCGAAGGC TCTCTGGCCA CGCCTGAACG CCCCGTCACT GCGGTTGTGG GCGGCGCCAA AGTTTCGACC AAACTGGACC TTCTGGGCAA TCTGGTGGCC AAGGTAGACA CGCTTGTGAT CGGCGGCGGC ATGGCCAATA CCTTTCTTGC GGCCCAAGGC ATCGACGTGG GCAAATCGCT TTGCGAACAT GACATGACAG GCACCGCCAA GGACATCATG GCCCGCGCCG AGGCGGCAGG CTGCACCATC CTGCTGCCGT CGGACGTGGT GGTCGCGCGC GAATTCAAGG CCGGCGCCGA CAATGAAACC GTACCCGCGG ACGCCTGCCC TGCGGATGCG ATGATCCTGG ATGCTGGCCC CGCCTCGGTT GCGGCCATTT CCACAGTCTT TGCCGAGAGC AAGACCCTGA TCTGGAACGG CCCGCTTGGT GCCTTTGAAA TCGCGCCCTT TGATATTGCG ACCAATACAG CGGCGCAAAA GGCGGCAGAA CTCACCAAGG CCGGCCAGCT GATTTCCGTT GCGGGCGGAG GCGACACCGT CGCTGCGCTC AATCAGGCCG GAGCGGCAGA GGCCTTTAGC TACATCTCCA CCGCCGGGGG CGCCTTCCTT GAGTGGATGG AGGGCAAGGT CCTGCCCGGC GTCGCTGCCC TGCAGACCTG A
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Protein sequence | MGWKTLDDMD LQGKSVLTRV DINVPMEDGK VTDDTRIRRL VPTISDLLSK GAKPVLLAHF GRPKGKVVPE MSLQPLVPAL EAAFGAPVMF VADCRGPAAK GAVDALAPGQ ILLLENTRFY PGEEQNDADL AKEMAALGDI YCNDAFSAAH RAHASTEALA RLLPACAGRL MEAELKALEG SLATPERPVT AVVGGAKVST KLDLLGNLVA KVDTLVIGGG MANTFLAAQG IDVGKSLCEH DMTGTAKDIM ARAEAAGCTI LLPSDVVVAR EFKAGADNET VPADACPADA MILDAGPASV AAISTVFAES KTLIWNGPLG AFEIAPFDIA TNTAAQKAAE LTKAGQLISV AGGGDTVAAL NQAGAAEAFS YISTAGGAFL EWMEGKVLPG VAALQT
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