| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0999 |
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| Symbol | |
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| ID | 4078219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1071433 |
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| End bp | 1072047 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638006303 |
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| Product | cytochrome c biogenesis protein CcmA |
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| Protein accession | YP_612994 |
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| Protein GI | 99080840 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.15365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAGG TCAGGGATCT AGGGGTCAGC CGGGGCGGGC TGCCGGTGCT CGCGGGGGTG
AACTTCGCGT TGTCGGGCGG TGAGGCGCTT GTGCTGCGCG GGCCCAACGG GATCGGCAAA
ACCACGCTTC TGCGCACGCT GGCGCGTCTG CAGCTGCCTT TGGCGGGCGA GATCCTCGGG
GACGCCGAGG ATATTGCCTA TGCCGCCCAT GCGGATGGGG TAAAACTCAC TTTGACCGTG
GCCGAGAACC TGTCGTTCTG GTCGCGTGTC TTTGCGGGGG GCGACCCTGC GGTGGCCATC
GCGGCGTTTA ATCTCGATGC GCTACAGCAT CGCCCGGCCG GCGGGCTCTC GGCGGGGCAG
AAACGCAGGC TTTCCTTGGC GCGGCTCATG GTGACGGGGC GGCGGCTGTG GATCCTGGAT
GAGCCGACCG TGAGCCTTGA TGCAGCCTCT GTGCAATTGT TTGCCTCAAG CATCCGCGCC
CATCTGGCGT CGGGCGGAGC GGCGATCATG GCGACCCATA TCGACCTTGG GATCGAGGGC
AGGGTGCTGG ACCTTGGTCC CTTTAAGGCC AAGCTTCCGG CGCTGGACGC CGAGGATCTG
GGGGGCTTCT TGTGA
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| Protein sequence | MIEVRDLGVS RGGLPVLAGV NFALSGGEAL VLRGPNGIGK TTLLRTLARL QLPLAGEILG
DAEDIAYAAH ADGVKLTLTV AENLSFWSRV FAGGDPAVAI AAFNLDALQH RPAGGLSAGQ
KRRLSLARLM VTGRRLWILD EPTVSLDAAS VQLFASSIRA HLASGGAAIM ATHIDLGIEG
RVLDLGPFKA KLPALDAEDL GGFL
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