Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0910 |
Symbol | |
ID | 4076280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 971071 |
End bp | 971610 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638006212 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_612905 |
Protein GI | 99080751 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGCC ACGGTATGGA AAAAACAGAG ACCATTCGGA GCTCCGCGCG GGCGAGCCGT GGTATTGATG CATTGGACCG AAGAATATTA GGTGCGCTCA GCCGGGATGC CACCCAATCC TATGCCACGA TCAGTGAACA GGTCGGGCTC TCGGCACCGG CGGTGCATGA ACGTGTGAAA CGTCTTCGGG CCTCTGGGGC GATCAAGGCC ACCGTCGCAC AGATCGACGG CGCGCAAGTG GGAAAGCCGA TCCTCGCCTT TATCCATGTC GACACCATTG GCTGGGGTAA AACCCGCGAG ATCATGGCGC TCGAAGAGTT TCCCGAGGTG GAGGAAATCC ACTCCACCAC CGGCAATACC TGTCTCATAA TGAAGGTGCG TGTGGCCAGC CCACATGCGC TCGAGGGGCT CTTGTTCAAG ATCTACGATA TCGAAGGCGT GCGTGGCACC AGCACGTATC TGACGCTTTC GACGGTGCTT GAACGCTCTG CGCAAGCGGA TGTCACCGCC GATCTTGAAA GTGTCAGCTA CCCGCGCTGA
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Protein sequence | MKGHGMEKTE TIRSSARASR GIDALDRRIL GALSRDATQS YATISEQVGL SAPAVHERVK RLRASGAIKA TVAQIDGAQV GKPILAFIHV DTIGWGKTRE IMALEEFPEV EEIHSTTGNT CLIMKVRVAS PHALEGLLFK IYDIEGVRGT STYLTLSTVL ERSAQADVTA DLESVSYPR
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