Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0695 |
Symbol | |
ID | 4077362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 746416 |
End bp | 746994 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638005992 |
Product | nitroreductase |
Protein accession | YP_612690 |
Protein GI | 99080536 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.264494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0160033 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCAAC GCAATGATGC CGCTCTCGAT TTTCTGCAAA CCCGCCGGTC CCGCCCGGCC AAGACGCTTC AGGCTCCCGC CCCGACCCGT GCAGAGCTGA TGCCGCTCTT GACCGCCGCC GCGCGTACGC CCGACCATGG CAAGATGGAA CCCTGGCGGT TCATCGTGGT CGAGAAAGCT GCCATGCAGC GGCTCGGCGA CCTGACCGCC GAGGCCGGCC TGCGGCTTGG CAAGTCGCCA GAGGACATCG CCAAGGCGCG CAGCCAGTTC GATTTGGGCC AACTGGCTGT GGTCGTCGTC GAGATCCAGA AAGAGAGCCC AAAGATCCCG CCGATCGAGA TGACCTATTC CGCAGGTGCG GTCTGCCTTG CCCTGTTGAA TGCCGCGCTA GCTGCGGGTT GGGGCGCAAA CTGGCTCTCT GGCTGGATGA GCCATGACCG GGGCTTTTGT GAAGCCGCCT TTGATCTGGC CGAGAACGAG CGTATCGCCG GTCTCATCCA TATTGCCGCC GAAGGCGCCG CGCCGCCGGA ACGTCCGCGC CCCGATGTGA CGGCGCTTAC CACATGGGTC GAGACATGA
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Protein sequence | MPQRNDAALD FLQTRRSRPA KTLQAPAPTR AELMPLLTAA ARTPDHGKME PWRFIVVEKA AMQRLGDLTA EAGLRLGKSP EDIAKARSQF DLGQLAVVVV EIQKESPKIP PIEMTYSAGA VCLALLNAAL AAGWGANWLS GWMSHDRGFC EAAFDLAENE RIAGLIHIAA EGAAPPERPR PDVTALTTWV ET
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